DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LHVFPE
Uniprot ID:
O60269
Source protein:
G protein-regulated inducer of neurite outgrowth 2
Source gene:
GPRIN2
Class:
LIG_APCC_ABBA_1
Location:
360:365
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7761
ASA_SCORE:
86.95
COIL:
0.67
CONS_SCORE:
0.7012
DSS_SCORE:
0.2833
HELIX:
0.2605
FCONS_SCORE:
1.2199
RIG_SCORE:
0.8122
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L368V
TCGA-33-4586
LUSC
TCGA
LHVFPE
LIG_APCC_ABBA_1
0.25
p.L368V
DO27318
LUSC
ICGC
LHVFPE
LIG_APCC_ABBA_1
0.25
p.P357H
TCGA-AP-A059
UCEC
TCGA
LHVFPE
LIG_APCC_ABBA_1
0.25
p.P357H
DO41361
UCEC
ICGC
LHVFPE
LIG_APCC_ABBA_1
0.25
p.H361Q
TCGA-BF-A1PV
SKCM
TCGA
LHVFPE
LIG_APCC_ABBA_1
0.647
p.H361Q
DO47309
SKCM
ICGC
LHVFPE
LIG_APCC_ABBA_1
0.647
p.V362L
TCGA-BF-A1PV
SKCM
TCGA
LHVFPE
LIG_APCC_ABBA_1
0.5654
p.V362L
DO47309
SKCM
ICGC
LHVFPE
LIG_APCC_ABBA_1
0.5654
p.E365Q
DO48429
BLCA
ICGC
LHVFPE
LIG_APCC_ABBA_1
0.6744
p.P352L
DO233885
GACA
ICGC
LHVFPE
LIG_APCC_ABBA_1
0.1111
p.A356V
SIDM00761
Small Cell Lung Carcinoma
GDSC
LHVFPE
LIG_APCC_ABBA_1
0.2222
p.P352S
ACH-000865
Esophageal Cancer
CCLE
LHVFPE
LIG_APCC_ABBA_1
0.1111
p.P352S
ACH-002147
Skin Cancer
CCLE
LHVFPE
LIG_APCC_ABBA_1
0.1111
p.P352S
K2
skin
COSMIC
LHVFPE
LIG_APCC_ABBA_1
0.1111
Drug responses associated with GPRIN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LHVFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60269
G protein-regulated inducer of neurite outgrowth 2
LIG_APCC_ABBA_1
360:365
LHVFPE
APC,CDC20,FZR1
0.7761
More...