DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LIIHSE
Uniprot ID:
Q53SF7
Source protein:
Cordon-bleu protein-like 1
Source gene:
COBLL1
Class:
LIG_APCC_ABBA_1
Location:
663:668
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.526
ASA_SCORE:
106.2333
COIL:
0.8645
CONS_SCORE:
0.4456
DSS_SCORE:
0.4441
HELIX:
0.0238
FCONS_SCORE:
1.0862
RIG_SCORE:
0.7464
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P667A
SIDM00345
Non-Small Cell Lung Carcinoma
GDSC
LIIHSE
LIG_APCC_ABBA_1
0.7503
p.P667A
LCLC-103H
lung
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.7503
p.C668Y
ACH-000985
Colon/Colorectal Cancer
CCLE
LIIHSE
LIG_APCC_ABBA_1
0.7087
p.C668Y
LS-411N
large_intestine
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.7087
p.D669Y
DO41199
UCEC
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.3056
p.Q670R
DO50850
LIRI
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.2778
p.D661Y
SIDM01150
Non-Small Cell Lung Carcinoma
GDSC
LIIHSE
LIG_APCC_ABBA_1
0.2778
p.D661Y
NCI-H838
lung
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.2778
p.P670L
HuP-T4
pancreas
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.2778
p.T671I
ACH-001550
Skin Cancer
CCLE
LIIHSE
LIG_APCC_ABBA_1
0.25
p.T671I
MCC13
skin
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.25
p.V673L
DO225209
BRCA
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1944
p.V673I
DO49767
KIRP
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1944
p.V673I
DO38887
STAD
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1944
p.D657Y
TCGA-BR-8680
STAD
TCGA
LIIHSE
LIG_APCC_ABBA_1
0.1667
p.D657Y
DO47769
STAD
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1667
p.D657V
ACH-001365
Lung Cancer
CCLE
LIIHSE
LIG_APCC_ABBA_1
0.1667
p.D657V
NCI-H847
lung
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.1667
p.D675Y
DO222884
COCA
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1389
p.D675Y
DO42312
UCEC
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1389
p.T678I
ACH-000999
Colon/Colorectal Cancer
CCLE
LIIHSE
LIG_APCC_ABBA_1
0.0556
p.T678I
SNU-1040
large_intestine
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.0556
p.K653R
SK-OV-3
ovary
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.0556
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Drug responses associated with COBLL1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LIIHSE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53SF7
Cordon-bleu protein-like 1
LIG_APCC_ABBA_1
663:668
LIIHSE
APC,CDC20,FZR1
0.526
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