DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LIIHSE
Uniprot ID:
Q53SF7
Source protein:
Cordon-bleu protein-like 1
Source gene:
COBLL1
Class:
LIG_APCC_ABBA_1
Location:
663:668
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.526
ASA_SCORE:
106.2333
COIL:
0.8645
CONS_SCORE:
0.4456
DSS_SCORE:
0.4441
HELIX:
0.0238
FCONS_SCORE:
1.0862
RIG_SCORE:
0.7464
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D657Y
TCGA-BR-8680
STAD
TCGA
LIIHSE
LIG_APCC_ABBA_1
0.1667
p.D657Y
DO47769
STAD
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1667
p.V673L
DO225209
BRCA
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1944
p.D675Y
DO222884
COCA
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1389
p.D675Y
DO42312
UCEC
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1389
p.V673I
DO49767
KIRP
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1944
p.V673I
DO38887
STAD
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.1944
p.Q670R
DO50850
LIRI
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.2778
p.D669Y
DO41199
UCEC
ICGC
LIIHSE
LIG_APCC_ABBA_1
0.3056
p.P667A
SIDM00345
Non-Small Cell Lung Carcinoma
GDSC
LIIHSE
LIG_APCC_ABBA_1
0.7503
p.P667A
LCLC-103H
lung
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.7503
p.D661Y
SIDM01150
Non-Small Cell Lung Carcinoma
GDSC
LIIHSE
LIG_APCC_ABBA_1
0.2778
p.D661Y
NCI-H838
lung
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.2778
p.C668Y
ACH-000985
Colon/Colorectal Cancer
CCLE
LIIHSE
LIG_APCC_ABBA_1
0.7087
p.C668Y
LS-411N
large_intestine
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.7087
p.T678I
ACH-000999
Colon/Colorectal Cancer
CCLE
LIIHSE
LIG_APCC_ABBA_1
0.0556
p.T678I
SNU-1040
large_intestine
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.0556
p.D657V
ACH-001365
Lung Cancer
CCLE
LIIHSE
LIG_APCC_ABBA_1
0.1667
p.D657V
NCI-H847
lung
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.1667
p.T671I
ACH-001550
Skin Cancer
CCLE
LIIHSE
LIG_APCC_ABBA_1
0.25
p.T671I
MCC13
skin
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.25
p.P670L
HuP-T4
pancreas
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.2778
p.K653R
SK-OV-3
ovary
COSMIC
LIIHSE
LIG_APCC_ABBA_1
0.0556
Drug responses associated with COBLL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LIIHSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53SF7
Cordon-bleu protein-like 1
LIG_APCC_ABBA_1
663:668
LIIHSE
APC,CDC20,FZR1
0.526
More...