DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LIIYLD
Uniprot ID:
P01024
Source protein:
Complement C3
Source gene:
C3
Class:
LIG_APCC_ABBA_1
Location:
1444:1449
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5946
ASA_SCORE:
11.15
COIL:
0.0573
CONS_SCORE:
0.5021
DSS_SCORE:
0.0891
HELIX:
0.0035
FCONS_SCORE:
1.2741
RIG_SCORE:
0.9217
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N1442T
TCGA-27-2528
GBM
TCGA
LIIYLD
LIG_APCC_ABBA_1
0.2778
p.N1442T
DO11782
GBM
ICGC
LIIYLD
LIG_APCC_ABBA_1
0.2778
p.Y1447H
TCGA-BP-4998
KIRC
TCGA
LIIYLD
LIG_APCC_ABBA_1
0.6118
p.Y1447H
DO20210
KIRC
ICGC
LIIYLD
LIG_APCC_ABBA_1
0.6118
p.A1437T
TCGA-DA-A960
SKCM
TCGA
LIIYLD
LIG_APCC_ABBA_1
0.1389
p.A1437T
DO219482
SKCM
ICGC
LIIYLD
LIG_APCC_ABBA_1
0.1389
p.D1440N
TCGA-GN-A4U3
SKCM
TCGA
LIIYLD
LIG_APCC_ABBA_1
0.2222
p.D1440N
DO219484
SKCM
ICGC
LIIYLD
LIG_APCC_ABBA_1
0.2222
p.S1454C
TCGA-S5-AA26
BLCA
TCGA
LIIYLD
LIG_APCC_ABBA_1
0.1944
p.S1454C
DO51904
BLCA
ICGC
LIIYLD
LIG_APCC_ABBA_1
0.1944
p.V1451A
DO222503
COCA
ICGC
LIIYLD
LIG_APCC_ABBA_1
0.2778
p.D1449V
DO233759
GACA
ICGC
LIIYLD
LIG_APCC_ABBA_1
0.7785
p.R1441K
SIDM00014
Colorectal Carcinoma
GDSC
LIIYLD
LIG_APCC_ABBA_1
0.25
p.R1441K
LIM1215
large_intestine
COSMIC
LIIYLD
LIG_APCC_ABBA_1
0.25
Drug responses associated with C3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LIIYLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P01024
Complement C3
LIG_APCC_ABBA_1
1444:1449
LIIYLD
APC,CDC20,FZR1
0.5946
More...