DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LILFND
Uniprot ID:
P98174
Source protein:
FYVE, RhoGEF and PH domain-containing protein 1
Source gene:
FGD1
Class:
LIG_APCC_ABBA_1
Location:
612:617
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6282
ASA_SCORE:
17.1
COIL:
0.2415
CONS_SCORE:
0.5973
DSS_SCORE:
0.0288
HELIX:
0.042
FCONS_SCORE:
1.4773
RIG_SCORE:
0.9915
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D609Y
TCGA-EE-A184
SKCM
TCGA
LILFND
LIG_APCC_ABBA_1
0.25
p.D609Y
DO47442
SKCM
ICGC
LILFND
LIG_APCC_ABBA_1
0.25
p.R610Q
TCGA-EO-A22U
UCEC
TCGA
LILFND
LIG_APCC_ABBA_1
0.2778
p.R610Q
DO43755
UCEC
ICGC
LILFND
LIG_APCC_ABBA_1
0.2778
p.P624S
TCGA-EY-A549
UCEC
TCGA
LILFND
LIG_APCC_ABBA_1
0.1389
p.P624S
DO48174
UCEC
ICGC
LILFND
LIG_APCC_ABBA_1
0.1389
p.R618S
TCGA-YY-A8LH
PAAD
TCGA
LILFND
LIG_APCC_ABBA_1
0.3056
p.R618S
DO50273
PAAD
ICGC
LILFND
LIG_APCC_ABBA_1
0.3056
p.V623M
DO222991
BTCA
ICGC
LILFND
LIG_APCC_ABBA_1
0.1667
p.V623M
DO233200
GACA
ICGC
LILFND
LIG_APCC_ABBA_1
0.1667
p.V623M
SIDM01413
Oral Cavity Carcinoma
GDSC
LILFND
LIG_APCC_ABBA_1
0.1667
p.Q608K
DO229029
LICA
ICGC
LILFND
LIG_APCC_ABBA_1
0.2222
p.D609E
DO229022
LICA
ICGC
LILFND
LIG_APCC_ABBA_1
0.25
Drug responses associated with FGD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LILFND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98174
FYVE, RhoGEF and PH domain-containing protein 1
LIG_APCC_ABBA_1
612:617
LILFND
APC,CDC20,FZR1
0.6282
More...