DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LILYPD
Uniprot ID:
P51530
Source protein:
DNA replication ATP-dependent helicase/nuclease DNA2
Source gene:
DNA2
Class:
LIG_APCC_ABBA_1
Location:
117:122
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5095
ASA_SCORE:
12.9333
COIL:
0.4095
CONS_SCORE:
0.5351
DSS_SCORE:
0.0262
HELIX:
0.0093
FCONS_SCORE:
1.3137
RIG_SCORE:
0.989
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E110D
TCGA-49-4487
LUAD
TCGA
LILYPD
LIG_APCC_ABBA_1
0.1389
p.A109T
TCGA-63-A5MY
LUSC
TCGA
LILYPD
LIG_APCC_ABBA_1
0.1111
p.P108Q
TCGA-BR-4361
STAD
TCGA
LILYPD
LIG_APCC_ABBA_1
0.0833
p.G128E
TCGA-XF-A9SI
BLCA
TCGA
LILYPD
LIG_APCC_ABBA_1
0.1667
p.R132P
TCGA-XF-A9T3
BLCA
TCGA
LILYPD
LIG_APCC_ABBA_1
0.0556
p.I110L
DO8264
COAD
ICGC
LILYPD
LIG_APCC_ABBA_1
0.1389
p.G127D
DO19058
KIRC
ICGC
LILYPD
LIG_APCC_ABBA_1
0.1944
p.T128N
DO228976
LICA
ICGC
LILYPD
LIG_APCC_ABBA_1
0.1667
p.D113G
DO45283
LIRI
ICGC
LILYPD
LIG_APCC_ABBA_1
0.2222
p.I110V
DO45129
LIRI
ICGC
LILYPD
LIG_APCC_ABBA_1
0.1389
p.P121S
DO222727
MELA
ICGC
LILYPD
LIG_APCC_ABBA_1
0.5641
p.P121S
DO38028
SKCM
ICGC
LILYPD
LIG_APCC_ABBA_1
0.5641
p.D113Y
DO232761
PBCA
ICGC
LILYPD
LIG_APCC_ABBA_1
0.2222
p.D113Y
DO41758
UCEC
ICGC
LILYPD
LIG_APCC_ABBA_1
0.2222
p.S129N
DO41361
UCEC
ICGC
LILYPD
LIG_APCC_ABBA_1
0.1389
p.K112T
ACH-001991
Primary
CCLE
LILYPD
LIG_APCC_ABBA_1
0.3056
Drug responses associated with DNA2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LILYPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51530
DNA replication ATP-dependent helicase/nuclease DNA2
LIG_APCC_ABBA_1
117:122
LILYPD
APC,CDC20,FZR1
0.5095
More...