DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
LIPFGD
Uniprot ID:
Q5TC82
Source protein:
Roquin-1
Source gene:
RC3H1
Class:
LIG_APCC_ABBA_1
Location:
867:872
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9823
ASA_SCORE:
51.2
COIL:
0.7947
CONS_SCORE:
0.4014
DSS_SCORE:
0.5192
HELIX:
0.0383
FCONS_SCORE:
0.9408
RIG_SCORE:
0.7501
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I882M
TCGA-98-8021
LUSC
TCGA
LIPFGD
LIG_APCC_ABBA_1
0.0556
p.I882M
DO27468
LUSC
ICGC
LIPFGD
LIG_APCC_ABBA_1
0.0556
p.R857T
TCGA-FD-A43X
BLCA
TCGA
LIPFGD
LIG_APCC_ABBA_1
0.0556
p.R857T
DO44067
BLCA
ICGC
LIPFGD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with RC3H1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LIPFGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5TC82
Roquin-1
LIG_APCC_ABBA_1
867:872
LIPFGD
APC,CDC20,FZR1
0.9823
More...