DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LIPFTE
Uniprot ID:
Q7Z333
Source protein:
Probable helicase senataxin
Source gene:
SETX
Class:
LIG_APCC_ABBA_1
Location:
896:901
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9125
ASA_SCORE:
63.5833
COIL:
0.4763
CONS_SCORE:
0.2041
DSS_SCORE:
0.4046
HELIX:
0.2438
FCONS_SCORE:
1.0434
RIG_SCORE:
0.8078
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P898H
TCGA-49-6761
LUAD
TCGA
LIPFTE
LIG_APCC_ABBA_1
0.7694
p.P898H
DO24566
LUAD
ICGC
LIPFTE
LIG_APCC_ABBA_1
0.7694
p.E901D
TCGA-AP-A1DV
UCEC
TCGA
LIPFTE
LIG_APCC_ABBA_1
0.5647
p.E901D
DO43186
UCEC
ICGC
LIPFTE
LIG_APCC_ABBA_1
0.5647
p.G893C
TCGA-D3-A1QA
SKCM
TCGA
LIPFTE
LIG_APCC_ABBA_1
0.25
p.G893C
DO231672
LINC
ICGC
LIPFTE
LIG_APCC_ABBA_1
0.25
p.G893C
DO47469
SKCM
ICGC
LIPFTE
LIG_APCC_ABBA_1
0.25
p.K909N
TCGA-EO-A3AY
UCEC
TCGA
LIPFTE
LIG_APCC_ABBA_1
0.2222
p.K909N
DO43202
UCEC
ICGC
LIPFTE
LIG_APCC_ABBA_1
0.2222
p.G893A
DO232933
PEME
ICGC
LIPFTE
LIG_APCC_ABBA_1
0.25
p.P898S
DO229456
SKCA
ICGC
LIPFTE
LIG_APCC_ABBA_1
0.6752
p.V891A
SIDM00493
Other Solid Cancers
GDSC
LIPFTE
LIG_APCC_ABBA_1
0.1944
p.K908N
SIDM01588
Endometrial Carcinoma
GDSC
LIPFTE
LIG_APCC_ABBA_1
0.5833
p.K908N
ACH-000993
Endometrial/Uterine Cancer
CCLE
LIPFTE
LIG_APCC_ABBA_1
0.5833
Drug responses associated with SETX mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LIPFTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z333
Probable helicase senataxin
LIG_APCC_ABBA_1
896:901
LIPFTE
APC,CDC20,FZR1
0.9125
More...