DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LIPYQD
Uniprot ID:
Q8WUA4
Source protein:
General transcription factor 3C polypeptide 2
Source gene:
GTF3C2
Class:
LIG_APCC_ABBA_1
Location:
759:764
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8786
ASA_SCORE:
75.9667
COIL:
0.4632
CONS_SCORE:
0.3763
DSS_SCORE:
0.5151
HELIX:
0.0117
FCONS_SCORE:
0.8908
RIG_SCORE:
0.7095
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P761Q
TCGA-09-2044
OV
TCGA
LIPYQD
LIG_APCC_ABBA_1
0.7035
p.P761Q
TCGA-A5-A0G2
UCEC
TCGA
LIPYQD
LIG_APCC_ABBA_1
0.7035
p.P761Q
DO28923
OV
ICGC
LIPYQD
LIG_APCC_ABBA_1
0.7035
p.P761Q
DO41235
UCEC
ICGC
LIPYQD
LIG_APCC_ABBA_1
0.7035
p.R750Q
TCGA-AA-3984
COAD
TCGA
LIPYQD
LIG_APCC_ABBA_1
0.0833
p.R750Q
DO9002
COAD
ICGC
LIPYQD
LIG_APCC_ABBA_1
0.0833
p.R750Q
DO233203
GACA
ICGC
LIPYQD
LIG_APCC_ABBA_1
0.0833
p.R750Q
DO233731
GACA
ICGC
LIPYQD
LIG_APCC_ABBA_1
0.0833
p.P766T
TCGA-L5-A4OI
ESCA
TCGA
LIPYQD
LIG_APCC_ABBA_1
0.2778
p.P753S
DO229018
LICA
ICGC
LIPYQD
LIG_APCC_ABBA_1
0.1667
p.P761S
DO222749
MELA
ICGC
LIPYQD
LIG_APCC_ABBA_1
0.6752
p.P761L
DO222908
MELA
ICGC
LIPYQD
LIG_APCC_ABBA_1
0.6471
p.A774V
SIDM00216
Colorectal Carcinoma
GDSC
LIPYQD
LIG_APCC_ABBA_1
0.0556
p.A774V
ACH-000989
Colon/Colorectal Cancer
CCLE
LIPYQD
LIG_APCC_ABBA_1
0.0556
p.A774V
SNU-175
large_intestine
COSMIC
LIPYQD
LIG_APCC_ABBA_1
0.0556
p.S772F
ACH-001366
Neuroblastoma
CCLE
LIPYQD
LIG_APCC_ABBA_1
0.1111
p.Q763E
ACH-001864
Bile Duct Cancer
CCLE
LIPYQD
LIG_APCC_ABBA_1
0.5633
Drug responses associated with GTF3C2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LIPYQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WUA4
General transcription factor 3C polypeptide 2
LIG_APCC_ABBA_1
759:764
LIPYQD
APC,CDC20,FZR1
0.8786
More...