DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LITPKST
Uniprot ID:
P07359
Source protein:
Platelet glycoprotein Ib alpha chain
Source gene:
GP1BA
Class:
DEG_SCF_FBW7_1
Location:
471:477
E3 ligase:
FBXW7
DEGRON score:
0.632
ASA_SCORE:
90.0286
COIL:
0.8031
CONS_SCORE:
0.251
DSS_SCORE:
0.3433
HELIX:
0.0199
FCONS_SCORE:
0.8047
RIG_SCORE:
0.7787
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S461I
TCGA-B5-A0JN
UCEC
TCGA
LITPKST
DEG_SCF_FBW7_1
0.0556
p.S461I
DO41943
UCEC
ICGC
LITPKST
DEG_SCF_FBW7_1
0.0556
p.V485I
TCGA-CM-5861
COAD
TCGA
LITPKST
DEG_SCF_FBW7_1
0.1111
p.V485I
DO7918
COAD
ICGC
LITPKST
DEG_SCF_FBW7_1
0.1111
p.V485A
SIDM02059
Colorectal Carcinoma
GDSC
LITPKST
DEG_SCF_FBW7_1
0.1111
p.V466M
SIDM00572
Gastric Carcinoma
GDSC
LITPKST
DEG_SCF_FBW7_1
0.1944
p.V466M
ACH-000911
Gastric Cancer
CCLE
LITPKST
DEG_SCF_FBW7_1
0.1944
p.V466M
NUGC-3
stomach
COSMIC
LITPKST
DEG_SCF_FBW7_1
0.1944
p.V466A
SIDM01617
Endometrial Carcinoma
GDSC
LITPKST
DEG_SCF_FBW7_1
0.1944
p.V466A
ACH-000994
Endometrial/Uterine Cancer
CCLE
LITPKST
DEG_SCF_FBW7_1
0.1944
p.H485N
KYSE-410
oesophagus
COSMIC
LITPKST
DEG_SCF_FBW7_1
0.1111
Drug responses associated with GP1BA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LITPKST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07359
Platelet glycoprotein Ib alpha chain
DEG_SCF_FBW7_1
471:477
LITPKST
FBXW7
0.632
More...