DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LIVHED
Uniprot ID:
Q9BXA9
Source protein:
Sal-like protein 3
Source gene:
SALL3
Class:
LIG_APCC_ABBA_1
Location:
80:85
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9908
ASA_SCORE:
78.35
COIL:
0.7388
CONS_SCORE:
0.4296
DSS_SCORE:
0.5121
HELIX:
0.0655
FCONS_SCORE:
1.0758
RIG_SCORE:
0.7365
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S72R
TCGA-51-4080
LUSC
TCGA
LIVHED
LIG_APCC_ABBA_1
0.1111
p.P91T
TCGA-60-2724
LUSC
TCGA
LIVHED
LIG_APCC_ABBA_1
0.1667
p.P91T
DO26540
LUSC
ICGC
LIVHED
LIG_APCC_ABBA_1
0.1667
p.E84G
TCGA-AX-A2HJ
UCEC
TCGA
LIVHED
LIG_APCC_ABBA_1
0.6087
p.E84G
DO42105
UCEC
ICGC
LIVHED
LIG_APCC_ABBA_1
0.6087
p.A88V
TCGA-AX-A3G9
UCEC
TCGA
LIVHED
LIG_APCC_ABBA_1
0.25
p.A88V
DO222467
BTCA
ICGC
LIVHED
LIG_APCC_ABBA_1
0.25
p.A88V
DO23236
LINC
ICGC
LIVHED
LIG_APCC_ABBA_1
0.25
p.A88V
DO46331
OV
ICGC
LIVHED
LIG_APCC_ABBA_1
0.25
p.A88V
DO32992
PACA
ICGC
LIVHED
LIG_APCC_ABBA_1
0.25
p.A88V
DO41241
UCEC
ICGC
LIVHED
LIG_APCC_ABBA_1
0.25
p.L80M
TCGA-BR-8297
STAD
TCGA
LIVHED
LIG_APCC_ABBA_1
0.5999
p.R71W
TCGA-CG-4460
STAD
TCGA
LIVHED
LIG_APCC_ABBA_1
0.0833
p.R71W
DO38427
STAD
ICGC
LIVHED
LIG_APCC_ABBA_1
0.0833
p.E84K
TCGA-FS-A1ZZ
SKCM
TCGA
LIVHED
LIG_APCC_ABBA_1
0.591
p.E84K
DO222402
MELA
ICGC
LIVHED
LIG_APCC_ABBA_1
0.591
p.E84K
DO37412
SKCM
ICGC
LIVHED
LIG_APCC_ABBA_1
0.591
p.A86V
TCGA-HT-A5RC
LGG
TCGA
LIVHED
LIG_APCC_ABBA_1
0.3056
p.A86V
DO48525
LGG
ICGC
LIVHED
LIG_APCC_ABBA_1
0.3056
p.A86V
SIDM00216
Colorectal Carcinoma
GDSC
LIVHED
LIG_APCC_ABBA_1
0.3056
p.A86V
SIDM01511
Gastric Carcinoma
GDSC
LIVHED
LIG_APCC_ABBA_1
0.3056
p.A86V
ACH-000746
Gastric Cancer
CCLE
LIVHED
LIG_APCC_ABBA_1
0.3056
p.A86V
ACH-000989
Colon/Colorectal Cancer
CCLE
LIVHED
LIG_APCC_ABBA_1
0.3056
p.P89S
TCGA-L9-A5IP
LUAD
TCGA
LIVHED
LIG_APCC_ABBA_1
0.2222
p.P89S
DO49873
LUAD
ICGC
LIVHED
LIG_APCC_ABBA_1
0.2222
p.I81M
TCGA-N6-A4VC
UCS
TCGA
LIVHED
LIG_APCC_ABBA_1
0.6507
p.P91H
DO222990
BTCA
ICGC
LIVHED
LIG_APCC_ABBA_1
0.1667
p.R94S
DO20808
KIRP
ICGC
LIVHED
LIG_APCC_ABBA_1
0.0833
p.A78T
DO50755
LICA
ICGC
LIVHED
LIG_APCC_ABBA_1
0.2778
p.R94H
DO45428
LUSC
ICGC
LIVHED
LIG_APCC_ABBA_1
0.0833
p.P78L
DO220891
MELA
ICGC
LIVHED
LIG_APCC_ABBA_1
0.2778
p.P90H
DO46566
OV
ICGC
LIVHED
LIG_APCC_ABBA_1
0.1944
p.F94S
DO229453
SKCA
ICGC
LIVHED
LIG_APCC_ABBA_1
0.0833
p.F94S
ACH-002368
Non-Cancerous
CCLE
LIVHED
LIG_APCC_ABBA_1
0.0833
p.S95N
DO229211
THCA
ICGC
LIVHED
LIG_APCC_ABBA_1
0.0556
p.P90T
SIDM00919
Ovarian Carcinoma
GDSC
LIVHED
LIG_APCC_ABBA_1
0.1944
p.P90T
ACH-000713
Ovarian Cancer
CCLE
LIVHED
LIG_APCC_ABBA_1
0.1944
p.V79M
SIDM00716
Squamous Cell Lung Carcinoma
GDSC
LIVHED
LIG_APCC_ABBA_1
0.3056
p.V79M
ACH-000481
Lung Cancer
CCLE
LIVHED
LIG_APCC_ABBA_1
0.3056
p.V79M
NCI-H2170
lung
COSMIC
LIVHED
LIG_APCC_ABBA_1
0.3056
p.P77R
SIDM01140
Ovarian Carcinoma
GDSC
LIVHED
LIG_APCC_ABBA_1
0.25
p.P77R
ACH-001374
Ovarian Cancer
CCLE
LIVHED
LIG_APCC_ABBA_1
0.25
p.P77R
PA-1
ovary
COSMIC
LIVHED
LIG_APCC_ABBA_1
0.25
Drug responses associated with SALL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LIVHED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BXA9
Sal-like protein 3
LIG_APCC_ABBA_1
80:85
LIVHED
APC,CDC20,FZR1
0.9908
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