DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKDFTPGK
Uniprot ID:
Q99798
Source protein:
Aconitate hydratase, mitochondrial
Source gene:
ACO2
Class:
DEG_SCF_SKP2-CKS1_1
Location:
729:736
E3 ligase:
SKP2,CSK1
DEGRON score:
0.8946
ASA_SCORE:
72.9
COIL:
0.7026
CONS_SCORE:
0.3766
DSS_SCORE:
0.2456
HELIX:
0.1398
FCONS_SCORE:
1.1609
RIG_SCORE:
0.7619
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N746K
TCGA-78-8640
LUAD
TCGA
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.0556
p.N746K
DO45340
LUAD
ICGC
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.0556
p.Q727E
TCGA-D8-A27V
BRCA
TCGA
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.2778
p.Q727E
DO6048
BRCA
ICGC
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.2778
p.P745H
TCGA-EB-A1NK
SKCM
TCGA
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.0833
p.P745H
DO37695
SKCM
ICGC
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.0833
p.C740Y
SIDM00783
Colorectal Carcinoma
GDSC
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.2222
p.C740Y
HCT-116
large_intestine
COSMIC
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.2222
p.T722A
ACH-000132
Ovarian Cancer
CCLE
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.1389
p.T722A
JHOS-2
ovary
COSMIC
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.1389
p.T722N
ACH-000691
Breast Cancer
CCLE
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.1389
p.T722N
HCC2157
breast
COSMIC
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.1389
p.L732V
ACH-000861
Lung Cancer
CCLE
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.6765
p.L732V
HOP-62
lung
COSMIC
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.6765
p.P731S
ACH-000958
Colon/Colorectal Cancer
CCLE
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.6752
p.P731S
SW48
large_intestine
COSMIC
LKDFTPGK
DEG_SCF_SKP2-CKS1_1
0.6752
Drug responses associated with ACO2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKDFTPGK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99798
Aconitate hydratase, mitochondrial
DEG_SCF_SKP2-CKS1_1
729:736
LKDFTPGK
SKP2,CSK1
0.8946
More...