DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKDTPSSS
Uniprot ID:
Q9H9J4
Source protein:
Ubiquitin carboxyl-terminal hydrolase 42
Source gene:
USP42
Class:
DEG_SCF_FBW7_1
Location:
473:480
E3 ligase:
FBXW7
DEGRON score:
0.9601
ASA_SCORE:
95.6
COIL:
0.9255
CONS_SCORE:
0.3092
DSS_SCORE:
0.7351
HELIX:
0.0445
FCONS_SCORE:
0.977
RIG_SCORE:
0.5835
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S483N
DO228079
EOPC
ICGC
LKDTPSSS
DEG_SCF_FBW7_1
0.6944
p.S480T
DO233058
GACA
ICGC
LKDTPSSS
DEG_SCF_FBW7_1
0.6005
p.G486W
DO229019
LICA
ICGC
LKDTPSSS
DEG_SCF_FBW7_1
0.1667
p.T476S
DO50819
LIRI
ICGC
LKDTPSSS
DEG_SCF_FBW7_1
0.7116
p.N485S
DO222572
MELA
ICGC
LKDTPSSS
DEG_SCF_FBW7_1
0.1944
p.T476M
DO41199
UCEC
ICGC
LKDTPSSS
DEG_SCF_FBW7_1
0.7423
p.G471V
ACH-002042
Thyroid Cancer
CCLE
LKDTPSSS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with USP42 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKDTPSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H9J4
Ubiquitin carboxyl-terminal hydrolase 42
DEG_SCF_FBW7_1
473:480
LKDTPSSS
FBXW7
0.9601
More...