DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKGTPTWE
Uniprot ID:
O43593
Source protein:
Lysine-specific demethylase hairless
Source gene:
HR
Class:
DEG_SCF_FBW7_2
Location:
8:15
E3 ligase:
FBXW7
DEGRON score:
0.8799
ASA_SCORE:
72.2625
COIL:
0.7724
CONS_SCORE:
0.3836
DSS_SCORE:
0.7048
HELIX:
0.1243
FCONS_SCORE:
0.7967
RIG_SCORE:
0.6789
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E15D
TCGA-AJ-A3EK
UCEC
TCGA
LKGTPTWE
DEG_SCF_FBW7_2
0.6758
p.E15D
TCGA-S9-A7QX
LGG
TCGA
LKGTPTWE
DEG_SCF_FBW7_2
0.6758
p.E15D
DO50214
LGG
ICGC
LKGTPTWE
DEG_SCF_FBW7_2
0.6758
p.E15D
DO41584
UCEC
ICGC
LKGTPTWE
DEG_SCF_FBW7_2
0.6758
p.P5L
TCGA-CK-4951
COAD
TCGA
LKGTPTWE
DEG_SCF_FBW7_2
0.25
p.P5L
DO10582
COAD
ICGC
LKGTPTWE
DEG_SCF_FBW7_2
0.25
p.P12T
TCGA-EI-6917
READ
TCGA
LKGTPTWE
DEG_SCF_FBW7_2
0.7031
p.P12T
DO36881
READ
ICGC
LKGTPTWE
DEG_SCF_FBW7_2
0.7031
p.T13N
DO229037
LICA
ICGC
LKGTPTWE
DEG_SCF_FBW7_2
0.5944
p.E2K
SIDM00715
Non-Small Cell Lung Carcinoma
GDSC
LKGTPTWE
DEG_SCF_FBW7_2
0.1667
p.E2K
ACH-000521
Lung Cancer
CCLE
LKGTPTWE
DEG_SCF_FBW7_2
0.1667
p.E2K
NCI-H2030
lung
COSMIC
LKGTPTWE
DEG_SCF_FBW7_2
0.1667
p.V24M
SIDM00343
Glioblastoma
GDSC
LKGTPTWE
DEG_SCF_FBW7_2
0.0833
p.V24M
LN-405
central_nervous_system
COSMIC
LKGTPTWE
DEG_SCF_FBW7_2
0.0833
p.N21K
SIDM00645
Non-Small Cell Lung Carcinoma
GDSC
LKGTPTWE
DEG_SCF_FBW7_2
0.1667
p.N21K
ACH-000666
Lung Cancer
CCLE
LKGTPTWE
DEG_SCF_FBW7_2
0.1667
p.N21K
NCI-H1355
lung
COSMIC
LKGTPTWE
DEG_SCF_FBW7_2
0.1667
p.T13A
SIDM00941
Kidney Carcinoma
GDSC
LKGTPTWE
DEG_SCF_FBW7_2
0.6028
p.T13A
SIDM01121
Small Cell Lung Carcinoma
GDSC
LKGTPTWE
DEG_SCF_FBW7_2
0.6028
p.T13A
SIDM00218
Thyroid Gland Carcinoma
GDSC
LKGTPTWE
DEG_SCF_FBW7_2
0.6028
p.T13A
SIDM01590
Breast Carcinoma
GDSC
LKGTPTWE
DEG_SCF_FBW7_2
0.6028
Drug responses associated with HR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKGTPTWE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43593
Lysine-specific demethylase hairless
DEG_SCF_FBW7_2
8:15
LKGTPTWE
FBXW7
0.8799
More...