DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKLFCE
Uniprot ID:
O15016
Source protein:
Tripartite motif-containing protein 66
Source gene:
TRIM66
Class:
LIG_APCC_ABBA_1
Location:
73:78
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5402
ASA_SCORE:
39.6833
COIL:
0.2252
CONS_SCORE:
0.4699
DSS_SCORE:
0.0034
HELIX:
0.0197
FCONS_SCORE:
1.4568
RIG_SCORE:
0.9639
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E78Q
TCGA-AR-A24L
BRCA
TCGA
LKLFCE
LIG_APCC_ABBA_1
0.6744
p.E78Q
DO3928
BRCA
ICGC
LKLFCE
LIG_APCC_ABBA_1
0.6744
p.E78Q
ACH-001402
Cervical Cancer
CCLE
LKLFCE
LIG_APCC_ABBA_1
0.6744
p.E78Q
SW756
cervix
COSMIC
LKLFCE
LIG_APCC_ABBA_1
0.6744
p.L63F
DO225013
BRCA
ICGC
LKLFCE
LIG_APCC_ABBA_1
0.0556
p.L63F
DO52557
BRCA
ICGC
LKLFCE
LIG_APCC_ABBA_1
0.0556
p.C88Y
ACH-000985
Colon/Colorectal Cancer
CCLE
LKLFCE
LIG_APCC_ABBA_1
0.0556
p.C88Y
LS-411N
large_intestine
COSMIC
LKLFCE
LIG_APCC_ABBA_1
0.0556
Drug responses associated with TRIM66 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKLFCE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15016
Tripartite motif-containing protein 66
LIG_APCC_ABBA_1
73:78
LKLFCE
APC,CDC20,FZR1
0.5402
More...