DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LKLFDD
Uniprot ID:
Q53T59
Source protein:
HCLS1-binding protein 3
Source gene:
HS1BP3
Class:
LIG_APCC_ABBA_1
Location:
263:268
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9327
ASA_SCORE:
67.8833
COIL:
0.6707
CONS_SCORE:
0.4503
DSS_SCORE:
0.4863
HELIX:
0.2102
FCONS_SCORE:
1.1801
RIG_SCORE:
0.7829
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D270A
TCGA-BG-A222
UCEC
TCGA
LKLFDD
LIG_APCC_ABBA_1
0.2778
p.D270A
DO42977
UCEC
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.2778
p.P253L
TCGA-DA-A95X
SKCM
TCGA
LKLFDD
LIG_APCC_ABBA_1
0.0556
p.P253L
DO229177
LMS
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.0556
p.P253L
DO219480
SKCM
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.0556
p.L271I
TCGA-DF-A2KU
UCEC
TCGA
LKLFDD
LIG_APCC_ABBA_1
0.25
p.L271I
DO223286
UCEC
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.25
p.S254L
DO229389
BTCA
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.5278
p.S254L
SIDM00444
Esophageal Carcinoma
GDSC
LKLFDD
LIG_APCC_ABBA_1
0.5278
p.S254L
OACM5-1
oesophagus
COSMIC
LKLFDD
LIG_APCC_ABBA_1
0.5278
p.V260M
DO229010
COCA
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.25
p.V260M
DO229013
COCA
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.25
p.V260M
DO229003
COCA
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.25
p.V260M
DO229005
COCA
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.25
p.V260M
DO223150
ESCA
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.25
p.V260M
DO229353
LAML
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.25
p.V260M
DO228941
LICA
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.25
p.V260M
DO229047
LICA
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.25
p.V260M
DO230529
LUSC
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.25
p.P262S
DO233267
GACA
ICGC
LKLFDD
LIG_APCC_ABBA_1
0.3056
p.DP261DS
DO222775
MELA
ICGC
LKLFDD
LIG_APCC_ABBA_1
0
p.G273R
SIDM01116
Non-Small Cell Lung Carcinoma
GDSC
LKLFDD
LIG_APCC_ABBA_1
0.1944
p.G273R
SIDM00694
Other Solid Cancers
GDSC
LKLFDD
LIG_APCC_ABBA_1
0.1944
p.G273R
SIDM00863
Burkitt's Lymphoma
GDSC
LKLFDD
LIG_APCC_ABBA_1
0.1944
p.G273R
SIDM01173
Rhabdomyosarcoma
GDSC
LKLFDD
LIG_APCC_ABBA_1
0.1944
p.G273R
SIDM00785
Acute Myeloid Leukemia
GDSC
LKLFDD
LIG_APCC_ABBA_1
0.1944
p.G273R
SIDM01318
Hepatocellular Carcinoma
GDSC
LKLFDD
LIG_APCC_ABBA_1
0.1944
p.G273R
SIDM01686
Chronic Myelogenous Leukemia
GDSC
LKLFDD
LIG_APCC_ABBA_1
0.1944
p.G273R
SIDM01710
Squamous Cell Lung Carcinoma
GDSC
LKLFDD
LIG_APCC_ABBA_1
0.1944
Drug responses associated with HS1BP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKLFDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53T59
HCLS1-binding protein 3
LIG_APCC_ABBA_1
263:268
LKLFDD
APC,CDC20,FZR1
0.9327
More...