DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LKLHTE
Uniprot ID:
Q8NG31
Source protein:
Kinetochore scaffold 1
Source gene:
KNL1
Class:
LIG_APCC_ABBA_1
Location:
212:217
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9447
ASA_SCORE:
104.4
COIL:
0.7712
CONS_SCORE:
0.4355
DSS_SCORE:
0.329
HELIX:
0.2145
FCONS_SCORE:
1.0079
RIG_SCORE:
0.7861
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E217K
SIDM01199
Hepatocellular Carcinoma
GDSC
LKLHTE
LIG_APCC_ABBA_1
0.7022
p.E217K
SIDM00383
Gastric Carcinoma
GDSC
LKLHTE
LIG_APCC_ABBA_1
0.7022
p.E217K
SIDM00325
Esophageal Squamous Cell Carcinoma
GDSC
LKLHTE
LIG_APCC_ABBA_1
0.7022
p.E217K
SIDM00361
Non-Small Cell Lung Carcinoma
GDSC
LKLHTE
LIG_APCC_ABBA_1
0.7022
p.E217K
SIDM01450
Gastric Carcinoma
GDSC
LKLHTE
LIG_APCC_ABBA_1
0.7022
p.E217K
SIDM01762
Esophageal Squamous Cell Carcinoma
GDSC
LKLHTE
LIG_APCC_ABBA_1
0.7022
p.C227Y
NCI-H1155
lung
COSMIC
LKLHTE
LIG_APCC_ABBA_1
0.0556
Drug responses associated with KNL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKLHTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NG31
Kinetochore scaffold 1
LIG_APCC_ABBA_1
212:217
LKLHTE
APC,CDC20,FZR1
0.9447
More...