DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKLYCE
Uniprot ID:
P14373
Source protein:
Zinc finger protein RFP
Source gene:
TRIM27
Class:
LIG_APCC_ABBA_1
Location:
103:108
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6564
ASA_SCORE:
51.7333
COIL:
0.251
CONS_SCORE:
0.7272
DSS_SCORE:
0.1638
HELIX:
0.0237
FCONS_SCORE:
1.2086
RIG_SCORE:
0.8175
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E109K
DO225347
BRCA
ICGC
LKLYCE
LIG_APCC_ABBA_1
0.3056
p.E109Q
SIDM00845
Burkitt's Lymphoma
GDSC
LKLYCE
LIG_APCC_ABBA_1
0.3056
p.E109Q
SIDM00946
T-Lymphoblastic Leukemia
GDSC
LKLYCE
LIG_APCC_ABBA_1
0.3056
p.E109Q
SIDM01519
Head and Neck Carcinoma
GDSC
LKLYCE
LIG_APCC_ABBA_1
0.3056
p.E109Q
ACH-000786
Lymphoma
CCLE
LKLYCE
LIG_APCC_ABBA_1
0.3056
p.E109Q
ACH-000981
Leukemia
CCLE
LKLYCE
LIG_APCC_ABBA_1
0.3056
p.E109Q
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
LKLYCE
LIG_APCC_ABBA_1
0.3056
p.E109Q
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
LKLYCE
LIG_APCC_ABBA_1
0.3056
p.Y106H
SIDM00789
Colorectal Carcinoma
GDSC
LKLYCE
LIG_APCC_ABBA_1
0.6118
p.Y106H
ACH-000997
Colon/Colorectal Cancer
CCLE
LKLYCE
LIG_APCC_ABBA_1
0.6118
p.Y106H
ACH-001061
Colon/Colorectal Cancer
CCLE
LKLYCE
LIG_APCC_ABBA_1
0.6118
p.V95M
SIDM01617
Endometrial Carcinoma
GDSC
LKLYCE
LIG_APCC_ABBA_1
0.1111
p.V95M
ACH-000994
Endometrial/Uterine Cancer
CCLE
LKLYCE
LIG_APCC_ABBA_1
0.1111
p.K98E
ACH-001991
Primary
CCLE
LKLYCE
LIG_APCC_ABBA_1
0.6389
Drug responses associated with TRIM27 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKLYCE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P14373
Zinc finger protein RFP
LIG_APCC_ABBA_1
103:108
LKLYCE
APC,CDC20,FZR1
0.6564
More...