DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LKPFFE
Uniprot ID:
Q6VY07
Source protein:
Phosphofurin acidic cluster sorting protein 1
Source gene:
PACS1
Class:
LIG_APCC_ABBA_1
Location:
399:404
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.995
ASA_SCORE:
81.85
COIL:
0.6542
CONS_SCORE:
0.6265
DSS_SCORE:
0.6288
HELIX:
0.1915
FCONS_SCORE:
1.2967
RIG_SCORE:
0.7257
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E389Q
TCGA-43-8118
LUSC
TCGA
LKPFFE
LIG_APCC_ABBA_1
0.0556
p.E389Q
DO45471
LUSC
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.0556
p.Q408R
TCGA-AP-A1DK
UCEC
TCGA
LKPFFE
LIG_APCC_ABBA_1
0.2222
p.Q408R
DO42033
UCEC
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.2222
p.P395L
TCGA-CZ-5459
KIRC
TCGA
LKPFFE
LIG_APCC_ABBA_1
0.2222
p.P395L
DO17452
KIRC
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.2222
p.S407L
TCGA-EE-A29D
SKCM
TCGA
LKPFFE
LIG_APCC_ABBA_1
0.6944
p.S407L
DO38123
SKCM
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.6944
p.P401S
TCGA-EE-A2MR
SKCM
TCGA
LKPFFE
LIG_APCC_ABBA_1
0.6752
p.P401S
DO37819
SKCM
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.6752
p.F402L
TCGA-EY-A1G8
UCEC
TCGA
LKPFFE
LIG_APCC_ABBA_1
0.6981
p.F402L
DO43578
UCEC
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.6981
p.T394M
TCGA-FI-A2D5
UCEC
TCGA
LKPFFE
LIG_APCC_ABBA_1
0.6389
p.T394M
TCGA-KQ-A41S
BLCA
TCGA
LKPFFE
LIG_APCC_ABBA_1
0.6389
p.T394M
DO223593
BLCA
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.6389
p.T394M
DO41331
UCEC
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.6389
p.M411I
DO234388
ESAD
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.5833
p.S393N
DO233903
GACA
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.1667
p.S391L
DO15286
HNSC
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.1111
p.E414D
DO228948
LICA
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.0556
p.R390L
DO228974
LICA
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.0833
p.S400I
DO229022
LICA
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.7341
p.L392H
DO229221
THCA
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.1389
p.S406A
DO41903
UCEC
ICGC
LKPFFE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with PACS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKPFFE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6VY07
Phosphofurin acidic cluster sorting protein 1
LIG_APCC_ABBA_1
399:404
LKPFFE
APC,CDC20,FZR1
0.995
More...