DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKPFQD
Uniprot ID:
P48634
Source protein:
Protein PRRC2A
Source gene:
PRRC2A
Class:
LIG_APCC_ABBA_1
Location:
2055:2060
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9424
ASA_SCORE:
93.4833
COIL:
0.788
CONS_SCORE:
0.646
DSS_SCORE:
0.5022
HELIX:
0.181
FCONS_SCORE:
1.111
RIG_SCORE:
0.7659
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L2045F
TCGA-CN-6010
HNSC
TCGA
LKPFQD
LIG_APCC_ABBA_1
0.0556
p.L2045F
DO14766
HNSC
ICGC
LKPFQD
LIG_APCC_ABBA_1
0.0556
p.S2066I
TCGA-DX-A8BG
SARC
TCGA
LKPFQD
LIG_APCC_ABBA_1
0.1667
p.S2066I
DO220042
SARC
ICGC
LKPFQD
LIG_APCC_ABBA_1
0.1667
p.P2057L
TCGA-G4-6302
COAD
TCGA
LKPFQD
LIG_APCC_ABBA_1
0.6471
p.P2057L
DO8778
COAD
ICGC
LKPFQD
LIG_APCC_ABBA_1
0.6471
p.P2057L
DO50733
ORCA
ICGC
LKPFQD
LIG_APCC_ABBA_1
0.6471
p.P2057L
SIDM02021
Esophageal Carcinoma
GDSC
LKPFQD
LIG_APCC_ABBA_1
0.6471
p.F2058L
DO225192
BRCA
ICGC
LKPFQD
LIG_APCC_ABBA_1
0.6981
p.L2055P
SIDM00185
Melanoma
GDSC
LKPFQD
LIG_APCC_ABBA_1
0.7582
p.L2055P
ACH-002152
Skin Cancer
CCLE
LKPFQD
LIG_APCC_ABBA_1
0.7582
p.L2055P
LB2518-MEL
skin
COSMIC
LKPFQD
LIG_APCC_ABBA_1
0.7582
Drug responses associated with PRRC2A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKPFQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48634
Protein PRRC2A
LIG_APCC_ABBA_1
2055:2060
LKPFQD
APC,CDC20,FZR1
0.9424
More...