DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKPFVE
Uniprot ID:
P27448
Source protein:
MAP/microtubule affinity-regulating kinase 3
Source gene:
MARK3
Class:
LIG_APCC_ABBA_1
Location:
316:321
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8092
ASA_SCORE:
91.0333
COIL:
0.9158
CONS_SCORE:
0.4582
DSS_SCORE:
0.4859
HELIX:
0.0452
FCONS_SCORE:
1.0909
RIG_SCORE:
0.7873
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.W306L
TCGA-D3-A1Q6
SKCM
TCGA
LKPFVE
LIG_APCC_ABBA_1
0.0556
p.W306L
DO37450
SKCM
ICGC
LKPFVE
LIG_APCC_ABBA_1
0.0556
p.A309S
DO231937
LICA
ICGC
LKPFVE
LIG_APCC_ABBA_1
0.1389
p.R318H
RCH-ACV
haematopoietic_and_lymphoid_tissue
COSMIC
LKPFVE
LIG_APCC_ABBA_1
0.8244
p.S317I
JHH-7
liver
COSMIC
LKPFVE
LIG_APCC_ABBA_1
0.7341
p.R309T
HT-1376
urinary_tract
COSMIC
LKPFVE
LIG_APCC_ABBA_1
0.1389
Drug responses associated with MARK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKPFVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P27448
MAP/microtubule affinity-regulating kinase 3
LIG_APCC_ABBA_1
316:321
LKPFVE
APC,CDC20,FZR1
0.8092
More...