DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKPFVE
Uniprot ID:
P27448
Source protein:
MAP/microtubule affinity-regulating kinase 3
Source gene:
MARK3
Class:
LIG_APCC_ABBA_1
Location:
316:321
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8092
ASA_SCORE:
91.0333
COIL:
0.9158
CONS_SCORE:
0.4582
DSS_SCORE:
0.4859
HELIX:
0.0452
FCONS_SCORE:
1.0909
RIG_SCORE:
0.7873
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R318H
RCH-ACV
haematopoietic_and_lymphoid_tissue
COSMIC
LKPFVE
LIG_APCC_ABBA_1
0.8244
p.S317I
JHH-7
liver
COSMIC
LKPFVE
LIG_APCC_ABBA_1
0.7341
p.A309S
DO231937
LICA
ICGC
LKPFVE
LIG_APCC_ABBA_1
0.1389
p.R309T
HT-1376
urinary_tract
COSMIC
LKPFVE
LIG_APCC_ABBA_1
0.1389
p.W306L
TCGA-D3-A1Q6
SKCM
TCGA
LKPFVE
LIG_APCC_ABBA_1
0.0556
p.W306L
DO37450
SKCM
ICGC
LKPFVE
LIG_APCC_ABBA_1
0.0556
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Drug responses associated with MARK3 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LKPFVE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P27448
MAP/microtubule affinity-regulating kinase 3
LIG_APCC_ABBA_1
316:321
LKPFVE
APC,CDC20,FZR1
0.8092
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