DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKPHQE
Uniprot ID:
O00124
Source protein:
UBX domain-containing protein 8
Source gene:
UBXN8
Class:
LIG_APCC_ABBA_1
Location:
103:108
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9592
ASA_SCORE:
103.2
COIL:
0.4122
CONS_SCORE:
0.5558
DSS_SCORE:
0.3993
HELIX:
0.587
FCONS_SCORE:
1.1426
RIG_SCORE:
0.7798
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I99T
SIDM00346
Chronic Myelogenous Leukemia
GDSC
LKPHQE
LIG_APCC_ABBA_1
0.2222
p.S101L
HCC-44
lung
COSMIC
LKPHQE
LIG_APCC_ABBA_1
0.2778
p.S101L
CAL-62
thyroid
COSMIC
LKPHQE
LIG_APCC_ABBA_1
0.2778
p.L97F
SAT
upper_aerodigestive_tract
COSMIC
LKPHQE
LIG_APCC_ABBA_1
0.1667
p.L97F
JHOS-3
ovary
COSMIC
LKPHQE
LIG_APCC_ABBA_1
0.1667
Drug responses associated with UBXN8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKPHQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00124
UBX domain-containing protein 8
LIG_APCC_ABBA_1
103:108
LKPHQE
APC,CDC20,FZR1
0.9592
More...