DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKPTPGGS
Uniprot ID:
Q8IXK0
Source protein:
Polyhomeotic-like protein 2
Source gene:
PHC2
Class:
DEG_SCF_FBW7_1
Location:
252:259
E3 ligase:
FBXW7
DEGRON score:
0.9936
ASA_SCORE:
85.2625
COIL:
0.9639
CONS_SCORE:
0.4798
DSS_SCORE:
0.7293
HELIX:
0.0131
FCONS_SCORE:
1.1263
RIG_SCORE:
0.5569
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q260P
TCGA-14-0866
GBM
TCGA
LKPTPGGS
DEG_SCF_FBW7_1
0.3056
p.Q260P
DO11878
GBM
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.3056
p.P245H
TCGA-AG-A002
READ
TCGA
LKPTPGGS
DEG_SCF_FBW7_1
0.1389
p.T255M
TCGA-EO-A22U
UCEC
TCGA
LKPTPGGS
DEG_SCF_FBW7_1
0.7423
p.G252C
DO48414
BLCA
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.76
p.G257V
DO228431
BRCA
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.6421
p.E249K
DO3662
BRCA
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.25
p.E249A
DO3662
BRCA
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.25
p.L250I
DO229019
LICA
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.2778
p.L250I
DO50861
LICA
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.2778
p.Q244K
DO229045
LICA
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.1111
p.D255N
DO229058
LICA
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.6932
p.P254S
DO230550
LUSC
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.5641
p.P243S
DO37406
SKCM
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.0833
p.P243L
DO50291
SKCM
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.0833
p.A251S
DO229253
THCA
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.3056
p.D255E
DO41235
UCEC
ICGC
LKPTPGGS
DEG_SCF_FBW7_1
0.6758
p.P254A
SIDM00177
Melanoma
GDSC
LKPTPGGS
DEG_SCF_FBW7_1
0.6392
Drug responses associated with PHC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKPTPGGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IXK0
Polyhomeotic-like protein 2
DEG_SCF_FBW7_1
252:259
LKPTPGGS
FBXW7
0.9936
More...