DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKSTPVAT
Uniprot ID:
Q9UPV9
Source protein:
Trafficking kinesin-binding protein 1
Source gene:
TRAK1
Class:
DEG_SCF_FBW7_1
Location:
704:711
E3 ligase:
FBXW7
DEGRON score:
0.9979
ASA_SCORE:
101.95
COIL:
0.946
CONS_SCORE:
0.3385
DSS_SCORE:
0.4995
HELIX:
0.0211
FCONS_SCORE:
1.0413
RIG_SCORE:
0.6804
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T707M
TCGA-AA-3947
COAD
TCGA
LKSTPVAT
DEG_SCF_FBW7_1
0.8534
p.T707M
TCGA-AJ-A3BH
UCEC
TCGA
LKSTPVAT
DEG_SCF_FBW7_1
0.8534
p.T707M
DO8192
COAD
ICGC
LKSTPVAT
DEG_SCF_FBW7_1
0.8534
p.T707M
DO41638
UCEC
ICGC
LKSTPVAT
DEG_SCF_FBW7_1
0.8534
p.S702N
TCGA-D1-A17K
UCEC
TCGA
LKSTPVAT
DEG_SCF_FBW7_1
0.2778
p.S702N
DO42937
UCEC
ICGC
LKSTPVAT
DEG_SCF_FBW7_1
0.2778
p.P708L
TCGA-EO-A22U
UCEC
TCGA
LKSTPVAT
DEG_SCF_FBW7_1
0.7582
p.P708L
DO43755
UCEC
ICGC
LKSTPVAT
DEG_SCF_FBW7_1
0.7582
p.A721S
DO229019
LICA
ICGC
LKSTPVAT
DEG_SCF_FBW7_1
0.0556
p.S719I
DO229006
LICA
ICGC
LKSTPVAT
DEG_SCF_FBW7_1
0.5556
p.S702R
SIDM00515
Melanoma
GDSC
LKSTPVAT
DEG_SCF_FBW7_1
0.2778
p.S702R
ACH-000401
Skin Cancer
CCLE
LKSTPVAT
DEG_SCF_FBW7_1
0.2778
p.S702R
ACH-001339
Skin Cancer
CCLE
LKSTPVAT
DEG_SCF_FBW7_1
0.2778
p.S702R
COLO-800
skin
COSMIC
LKSTPVAT
DEG_SCF_FBW7_1
0.2778
p.C713R
ACH-000373
Leukemia
CCLE
LKSTPVAT
DEG_SCF_FBW7_1
0.2778
p.C713R
ACH-000452
Esophageal Cancer
CCLE
LKSTPVAT
DEG_SCF_FBW7_1
0.2778
p.V709L
ACH-000950
Colon/Colorectal Cancer
CCLE
LKSTPVAT
DEG_SCF_FBW7_1
0.5654
p.V709A
ACH-001786
Colon/Colorectal Cancer
CCLE
LKSTPVAT
DEG_SCF_FBW7_1
0.5825
p.G705S
OVMIU
ovary
COSMIC
LKSTPVAT
DEG_SCF_FBW7_1
0.6993
p.M717V
769-P
kidney
COSMIC
LKSTPVAT
DEG_SCF_FBW7_1
0.1667
p.R706Q
SCC-9
upper_aerodigestive_tract
COSMIC
LKSTPVAT
DEG_SCF_FBW7_1
0.7329
p.Y713C
CCK-81
large_intestine
COSMIC
LKSTPVAT
DEG_SCF_FBW7_1
0.2778
p.A694V
SK-MEL-2
skin
COSMIC
LKSTPVAT
DEG_SCF_FBW7_1
0.0556
Drug responses associated with TRAK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKSTPVAT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPV9
Trafficking kinesin-binding protein 1
DEG_SCF_FBW7_1
704:711
LKSTPVAT
FBXW7
0.9979
More...