DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKTPIRS
Uniprot ID:
Q15436
Source protein:
Protein transport protein Sec23A
Source gene:
SEC23A
Class:
DEG_SCF_FBW7_1
Location:
306:312
E3 ligase:
FBXW7
DEGRON score:
0.9604
ASA_SCORE:
67.8714
COIL:
0.807
CONS_SCORE:
0.5769
DSS_SCORE:
0.3997
HELIX:
0.1189
FCONS_SCORE:
0.9626
RIG_SCORE:
0.7938
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D319G
TCGA-A5-A0G2
UCEC
TCGA
LKTPIRS
DEG_SCF_FBW7_1
0.1389
p.D304Y
TCGA-AJ-A3EK
UCEC
TCGA
LKTPIRS
DEG_SCF_FBW7_1
0.2778
p.K318N
TCGA-AZ-4315
COAD
TCGA
LKTPIRS
DEG_SCF_FBW7_1
0.2778
p.P298L
TCGA-C8-A12T
BRCA
TCGA
LKTPIRS
DEG_SCF_FBW7_1
0.1111
p.S312L
TCGA-EI-6882
READ
TCGA
LKTPIRS
DEG_SCF_FBW7_1
0.7667
p.S312L
SIDM01962
Colorectal Carcinoma
GDSC
LKTPIRS
DEG_SCF_FBW7_1
0.7667
p.D319E
TCGA-HQ-A2OE
BLCA
TCGA
LKTPIRS
DEG_SCF_FBW7_1
0.1389
p.C318S
DO5284
BRCA
ICGC
LKTPIRS
DEG_SCF_FBW7_1
0.2778
p.L300R
DO222576
COCA
ICGC
LKTPIRS
DEG_SCF_FBW7_1
0.1667
p.K303E
DO234168
ESAD
ICGC
LKTPIRS
DEG_SCF_FBW7_1
0.25
p.P305R
DO233732
GACA
ICGC
LKTPIRS
DEG_SCF_FBW7_1
0.3056
p.T314K
DO229026
LICA
ICGC
LKTPIRS
DEG_SCF_FBW7_1
0.2778
p.A321T
SIDM00602
Gastric Carcinoma
GDSC
LKTPIRS
DEG_SCF_FBW7_1
0.0833
p.A321T
ACH-000919
Gastric Cancer
CCLE
LKTPIRS
DEG_SCF_FBW7_1
0.0833
p.A321T
IM-95
stomach
COSMIC
LKTPIRS
DEG_SCF_FBW7_1
0.0833
p.P309S
ACH-001347
Head and Neck Cancer
CCLE
LKTPIRS
DEG_SCF_FBW7_1
0.6752
p.A320V
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LKTPIRS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with SEC23A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKTPIRS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15436
Protein transport protein Sec23A
DEG_SCF_FBW7_1
306:312
LKTPIRS
FBXW7
0.9604
More...