DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKTPLST
Uniprot ID:
O15457
Source protein:
MutS protein homolog 4
Source gene:
MSH4
Class:
DEG_SCF_FBW7_1
Location:
118:124
E3 ligase:
FBXW7
DEGRON score:
0.9997
ASA_SCORE:
78.2143
COIL:
0.8324
CONS_SCORE:
0.2909
DSS_SCORE:
0.6275
HELIX:
0.1056
FCONS_SCORE:
1.0709
RIG_SCORE:
0.7183
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R129G
TCGA-13-0764
OV
TCGA
LKTPLST
DEG_SCF_FBW7_1
0.1944
p.R129G
DO30930
OV
ICGC
LKTPLST
DEG_SCF_FBW7_1
0.1944
p.D111Y
TCGA-BS-A0UF
UCEC
TCGA
LKTPLST
DEG_SCF_FBW7_1
0.1389
p.D111Y
DO41488
UCEC
ICGC
LKTPLST
DEG_SCF_FBW7_1
0.1389
p.D111N
TCGA-IZ-8196
KIRP
TCGA
LKTPLST
DEG_SCF_FBW7_1
0.1389
p.D111N
DO44461
KIRP
ICGC
LKTPLST
DEG_SCF_FBW7_1
0.1389
p.A109T
DO222769
COCA
ICGC
LKTPLST
DEG_SCF_FBW7_1
0.0833
p.P121L
DO218898
SKCA
ICGC
LKTPLST
DEG_SCF_FBW7_1
0.7582
p.P127L
SIDM00545
Melanoma
GDSC
LKTPLST
DEG_SCF_FBW7_1
0.25
p.P127L
ACH-000987
Skin Cancer
CCLE
LKTPLST
DEG_SCF_FBW7_1
0.25
p.P127L
Mewo
skin
COSMIC
LKTPLST
DEG_SCF_FBW7_1
0.25
Drug responses associated with MSH4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKTPLST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15457
MutS protein homolog 4
DEG_SCF_FBW7_1
118:124
LKTPLST
FBXW7
0.9997
More...