DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LKTPVPS
Uniprot ID:
P11586
Source protein:
C-1-tetrahydrofolate synthase, cytoplasmic
Source gene:
MTHFD1
Class:
DEG_SCF_FBW7_1
Location:
312:318
E3 ligase:
FBXW7
DEGRON score:
0.7935
ASA_SCORE:
82.5143
COIL:
0.9023
CONS_SCORE:
0.4777
DSS_SCORE:
0.2785
HELIX:
0.0434
FCONS_SCORE:
1.1227
RIG_SCORE:
0.7678
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N308T
DO23458
LINC
ICGC
LKTPVPS
DEG_SCF_FBW7_1
0.2222
p.W303L
DO229275
THCA
ICGC
LKTPVPS
DEG_SCF_FBW7_1
0.0833
p.S322N
ACH-000292
Lung Cancer
CCLE
LKTPVPS
DEG_SCF_FBW7_1
0.2222
p.S322N
NCI-H841
lung
COSMIC
LKTPVPS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with MTHFD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKTPVPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P11586
C-1-tetrahydrofolate synthase, cytoplasmic
DEG_SCF_FBW7_1
312:318
LKTPVPS
FBXW7
0.7935
More...