DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKVHVE
Uniprot ID:
Q5VST9
Source protein:
Obscurin
Source gene:
OBSCN
Class:
LIG_APCC_ABBA_1
Location:
1026:1031
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6424
ASA_SCORE:
69.8833
COIL:
0.3137
CONS_SCORE:
0.4425
DSS_SCORE:
0.2889
HELIX:
0.0182
FCONS_SCORE:
0.8301
RIG_SCORE:
0.815
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1038K
TCGA-2F-A9KT
BLCA
TCGA
LKVHVE
LIG_APCC_ABBA_1
0.1389
p.R1038K
DO52599
BOCA
ICGC
LKVHVE
LIG_APCC_ABBA_1
0.1389
p.C1035R
TCGA-A5-A0GP
UCEC
TCGA
LKVHVE
LIG_APCC_ABBA_1
0.2222
p.R1038S
TCGA-AG-3891
READ
TCGA
LKVHVE
LIG_APCC_ABBA_1
0.1389
p.T1036M
TCGA-AX-A063
UCEC
TCGA
LKVHVE
LIG_APCC_ABBA_1
0.1944
p.T1036M
SIDM02035
Colorectal Carcinoma
GDSC
LKVHVE
LIG_APCC_ABBA_1
0.1944
p.R1037H
TCGA-B5-A3FC
UCEC
TCGA
LKVHVE
LIG_APCC_ABBA_1
0.1667
p.C1029Y
TCGA-XK-AAIW
PRAD
TCGA
LKVHVE
LIG_APCC_ABBA_1
0.7087
p.A1032V
DO8264
COAD
ICGC
LKVHVE
LIG_APCC_ABBA_1
0.3056
p.A1032S
DO229029
LICA
ICGC
LKVHVE
LIG_APCC_ABBA_1
0.3056
p.V1030L
DO229008
LICA
ICGC
LKVHVE
LIG_APCC_ABBA_1
0.5654
p.V1041L
DO24920
LUAD
ICGC
LKVHVE
LIG_APCC_ABBA_1
0.0556
p.L1022P
DO28731
OV
ICGC
LKVHVE
LIG_APCC_ABBA_1
0.2222
p.R1036G
DO229234
THCA
ICGC
LKVHVE
LIG_APCC_ABBA_1
0.1944
p.A1032P
SIDM00422
Hodgkin's Lymphoma
GDSC
LKVHVE
LIG_APCC_ABBA_1
0.3056
p.A1032P
ACH-001203
Lymphoma
CCLE
LKVHVE
LIG_APCC_ABBA_1
0.3056
p.A1032P
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
LKVHVE
LIG_APCC_ABBA_1
0.3056
p.R1038M
SIDM00789
Colorectal Carcinoma
GDSC
LKVHVE
LIG_APCC_ABBA_1
0.1389
p.R1038M
ACH-001061
Colon/Colorectal Cancer
CCLE
LKVHVE
LIG_APCC_ABBA_1
0.1389
p.R1038M
HCT-15
large_intestine
COSMIC
LKVHVE
LIG_APCC_ABBA_1
0.1389
p.C1029F
SIDM00369
Esophageal Squamous Cell Carcinoma
GDSC
LKVHVE
LIG_APCC_ABBA_1
0.7108
p.C1029F
ACH-000647
Esophageal Cancer
CCLE
LKVHVE
LIG_APCC_ABBA_1
0.7108
p.C1029F
TE-1
oesophagus
COSMIC
LKVHVE
LIG_APCC_ABBA_1
0.7108
p.M1030V
SIDM00231
Kidney Carcinoma
GDSC
LKVHVE
LIG_APCC_ABBA_1
0.7208
p.M1030V
ACH-002167
Kidney Cancer
CCLE
LKVHVE
LIG_APCC_ABBA_1
0.7208
p.M1030V
NCC010
kidney
COSMIC
LKVHVE
LIG_APCC_ABBA_1
0.7208
p.E1031G
SIDM01424
B-Lymphoblastic Leukemia
GDSC
LKVHVE
LIG_APCC_ABBA_1
0.7199
p.E1031G
ACH-000782
Leukemia
CCLE
LKVHVE
LIG_APCC_ABBA_1
0.7199
p.E1031G
ACH-001735
Leukemia
CCLE
LKVHVE
LIG_APCC_ABBA_1
0.7199
p.R1037Q
KOPN-8
haematopoietic_and_lymphoid_tissue
COSMIC
LKVHVE
LIG_APCC_ABBA_1
0.1667
p.D1018G
Caov-4
ovary
COSMIC
LKVHVE
LIG_APCC_ABBA_1
0.1111
p.R1037C
RL95-2
endometrium
COSMIC
LKVHVE
LIG_APCC_ABBA_1
0.1667
Drug responses associated with OBSCN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKVHVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VST9
Obscurin
LIG_APCC_ABBA_1
1026:1031
LKVHVE
APC,CDC20,FZR1
0.6424
More...