DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLATPQLT
Uniprot ID:
O95486
Source protein:
Protein transport protein Sec24A
Source gene:
SEC24A
Class:
DEG_SCF_FBW7_1
Location:
271:278
E3 ligase:
FBXW7
DEGRON score:
0.973
ASA_SCORE:
84.875
COIL:
0.9346
CONS_SCORE:
0.2499
DSS_SCORE:
0.5311
HELIX:
0.0261
FCONS_SCORE:
0.9487
RIG_SCORE:
0.7447
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G269C
TCGA-55-8620
LUAD
TCGA
LLATPQLT
DEG_SCF_FBW7_1
0.2778
p.G269C
DO24547
LUAD
ICGC
LLATPQLT
DEG_SCF_FBW7_1
0.2778
p.R286Q
TCGA-A5-A1OF
UCEC
TCGA
LLATPQLT
DEG_SCF_FBW7_1
0.1111
p.R286Q
TCGA-AX-A2HC
UCEC
TCGA
LLATPQLT
DEG_SCF_FBW7_1
0.1111
p.R286Q
DO41572
UCEC
ICGC
LLATPQLT
DEG_SCF_FBW7_1
0.1111
p.R286Q
DO42568
UCEC
ICGC
LLATPQLT
DEG_SCF_FBW7_1
0.1111
p.D264N
TCGA-AA-A010
COAD
TCGA
LLATPQLT
DEG_SCF_FBW7_1
0.1389
p.L271S
TCGA-EE-A2MS
SKCM
TCGA
LLATPQLT
DEG_SCF_FBW7_1
0.7667
p.L271S
DO37567
SKCM
ICGC
LLATPQLT
DEG_SCF_FBW7_1
0.7667
p.E265K
TCGA-Z6-AAPN
ESCA
TCGA
LLATPQLT
DEG_SCF_FBW7_1
0.1667
p.G269D
DO229050
LICA
ICGC
LLATPQLT
DEG_SCF_FBW7_1
0.2778
p.S285N
SIDM00082
Melanoma
GDSC
LLATPQLT
DEG_SCF_FBW7_1
0.1389
p.K283N
SIDM00193
Colorectal Carcinoma
GDSC
LLATPQLT
DEG_SCF_FBW7_1
0.3056
p.K283N
ACH-000991
Colon/Colorectal Cancer
CCLE
LLATPQLT
DEG_SCF_FBW7_1
0.3056
p.K283N
SNU-81
large_intestine
COSMIC
LLATPQLT
DEG_SCF_FBW7_1
0.3056
p.S261G
SIDM01677
Non-Small Cell Lung Carcinoma
GDSC
LLATPQLT
DEG_SCF_FBW7_1
0.0556
Drug responses associated with SEC24A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLATPQLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95486
Protein transport protein Sec24A
DEG_SCF_FBW7_1
271:278
LLATPQLT
FBXW7
0.973
More...