DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLIFLE
Uniprot ID:
Q9NPQ8
Source protein:
Synembryn-A
Source gene:
RIC8A
Class:
LIG_APCC_ABBA_1
Location:
313:318
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6369
ASA_SCORE:
30.4667
COIL:
0.0265
CONS_SCORE:
0.6899
DSS_SCORE:
0.0311
HELIX:
0.9643
FCONS_SCORE:
1.3004
RIG_SCORE:
0.9678
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R311C
TCGA-04-1361
OV
TCGA
LLIFLE
LIG_APCC_ABBA_1
0.2778
p.R311C
TCGA-AA-A00N
COAD
TCGA
LLIFLE
LIG_APCC_ABBA_1
0.2778
p.R311C
DO9876
COAD
ICGC
LLIFLE
LIG_APCC_ABBA_1
0.2778
p.R311C
DO32606
OV
ICGC
LLIFLE
LIG_APCC_ABBA_1
0.2778
p.M303I
TCGA-28-5211
GBM
TCGA
LLIFLE
LIG_APCC_ABBA_1
0.0556
p.M303I
DO11016
GBM
ICGC
LLIFLE
LIG_APCC_ABBA_1
0.0556
p.R320H
TCGA-86-6562
LUAD
TCGA
LLIFLE
LIG_APCC_ABBA_1
0.2778
p.R320H
DO24013
LUAD
ICGC
LLIFLE
LIG_APCC_ABBA_1
0.2778
p.H322R
TCGA-AX-A2HJ
UCEC
TCGA
LLIFLE
LIG_APCC_ABBA_1
0.2222
p.H322R
DO42105
UCEC
ICGC
LLIFLE
LIG_APCC_ABBA_1
0.2222
p.R311H
DO222526
ESCA
ICGC
LLIFLE
LIG_APCC_ABBA_1
0.2778
p.M307I
DO228971
LICA
ICGC
LLIFLE
LIG_APCC_ABBA_1
0.1667
p.R326M
DO229019
LICA
ICGC
LLIFLE
LIG_APCC_ABBA_1
0.1111
p.I315L
DO221131
MALY
ICGC
LLIFLE
LIG_APCC_ABBA_1
0.6063
p.R320C
DO42673
UCEC
ICGC
LLIFLE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with RIC8A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLIFLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NPQ8
Synembryn-A
LIG_APCC_ABBA_1
313:318
LLIFLE
APC,CDC20,FZR1
0.6369
More...