DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLKTPSSS
Uniprot ID:
Q9H0H5
Source protein:
Rac GTPase-activating protein 1
Source gene:
RACGAP1
Class:
DEG_SCF_FBW7_1
Location:
585:592
E3 ligase:
FBXW7
DEGRON score:
0.9765
ASA_SCORE:
87
COIL:
0.8618
CONS_SCORE:
0.3967
DSS_SCORE:
0.6184
HELIX:
0.1039
FCONS_SCORE:
0.8869
RIG_SCORE:
0.6763
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P577S
TCGA-AJ-A3EK
UCEC
TCGA
LLKTPSSS
DEG_SCF_FBW7_1
0.1111
p.P577S
DO41584
UCEC
ICGC
LLKTPSSS
DEG_SCF_FBW7_1
0.1111
p.P581S
TCGA-DK-A1AD
BLCA
TCGA
LLKTPSSS
DEG_SCF_FBW7_1
0.2222
p.P581S
DO459
BLCA
ICGC
LLKTPSSS
DEG_SCF_FBW7_1
0.2222
p.R597K
TCGA-EO-A3B0
UCEC
TCGA
LLKTPSSS
DEG_SCF_FBW7_1
0.1944
p.R597K
DO219773
UCEC
ICGC
LLKTPSSS
DEG_SCF_FBW7_1
0.1944
p.R597T
DO46330
OV
ICGC
LLKTPSSS
DEG_SCF_FBW7_1
0.1944
p.P589T
SIDM01240
Melanoma
GDSC
LLKTPSSS
DEG_SCF_FBW7_1
0.7031
p.P589T
ACH-001002
Skin Cancer
CCLE
LLKTPSSS
DEG_SCF_FBW7_1
0.7031
p.P589T
451Lu
skin
COSMIC
LLKTPSSS
DEG_SCF_FBW7_1
0.7031
p.R599H
ACH-000398
Lymphoma
CCLE
LLKTPSSS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with RACGAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLKTPSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H0H5
Rac GTPase-activating protein 1
DEG_SCF_FBW7_1
585:592
LLKTPSSS
FBXW7
0.9765
More...