DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLLFCD
Uniprot ID:
Q70JA7
Source protein:
Chondroitin sulfate synthase 3
Source gene:
CHSY3
Class:
LIG_APCC_ABBA_1
Location:
713:718
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5198
ASA_SCORE:
8.2667
COIL:
0.0887
CONS_SCORE:
0.6894
DSS_SCORE:
0.0146
HELIX:
0.0072
FCONS_SCORE:
1.2857
RIG_SCORE:
0.996
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L713S
DO222752
COCA
ICGC
LLLFCD
LIG_APCC_ABBA_1
0.7667
p.T712I
TCGA-BR-8059
STAD
TCGA
LLLFCD
LIG_APCC_ABBA_1
0.3056
p.T712I
DO38443
STAD
ICGC
LLLFCD
LIG_APCC_ABBA_1
0.3056
p.D720E
DO230451
UTCA
ICGC
LLLFCD
LIG_APCC_ABBA_1
0.2778
p.L721F
DO228743
LICA
ICGC
LLLFCD
LIG_APCC_ABBA_1
0.25
p.A706V
TCGA-AX-A2HD
UCEC
TCGA
LLLFCD
LIG_APCC_ABBA_1
0.1389
p.A706V
DO42608
UCEC
ICGC
LLLFCD
LIG_APCC_ABBA_1
0.1389
p.E725K
TCGA-DK-A6AW
BLCA
TCGA
LLLFCD
LIG_APCC_ABBA_1
0.1389
p.E725K
DO48566
BLCA
ICGC
LLLFCD
LIG_APCC_ABBA_1
0.1389
p.A706S
ACH-000786
Lymphoma
CCLE
LLLFCD
LIG_APCC_ABBA_1
0.1389
p.A704V
DO231893
LINC
ICGC
LLLFCD
LIG_APCC_ABBA_1
0.0833
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Drug responses associated with CHSY3 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LLLFCD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q70JA7
Chondroitin sulfate synthase 3
LIG_APCC_ABBA_1
713:718
LLLFCD
APC,CDC20,FZR1
0.5198
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