DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LLLHSD
Uniprot ID:
Q8WVM8
Source protein:
Sec1 family domain-containing protein 1
Source gene:
SCFD1
Class:
LIG_APCC_ABBA_1
Location:
74:79
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5394
ASA_SCORE:
77.6167
COIL:
0.684
CONS_SCORE:
0.5025
DSS_SCORE:
0.1441
HELIX:
0.0352
FCONS_SCORE:
0.7133
RIG_SCORE:
0.7946
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M68I
TCGA-BA-5151
HNSC
TCGA
LLLHSD
LIG_APCC_ABBA_1
0.1667
p.R82L
DO228986
LICA
ICGC
LLLHSD
LIG_APCC_ABBA_1
0.25
p.R86M
DO23561
LUAD
ICGC
LLLHSD
LIG_APCC_ABBA_1
0.1389
p.L64F
DO26445
LUSC
ICGC
LLLHSD
LIG_APCC_ABBA_1
0.0556
p.V79A
DO232224
PBCA
ICGC
LLLHSD
LIG_APCC_ABBA_1
0.6936
p.A83V
DO43306
UCEC
ICGC
LLLHSD
LIG_APCC_ABBA_1
0.2222
p.A83V
DO43755
UCEC
ICGC
LLLHSD
LIG_APCC_ABBA_1
0.2222
p.R82C
DO41999
UCEC
ICGC
LLLHSD
LIG_APCC_ABBA_1
0.25
p.R82C
DO41133
UCEC
ICGC
LLLHSD
LIG_APCC_ABBA_1
0.25
p.S78T
SIDM01045
Endometrial Carcinoma
GDSC
LLLHSD
LIG_APCC_ABBA_1
0.6005
p.S78T
ACH-000978
Endometrial/Uterine Cancer
CCLE
LLLHSD
LIG_APCC_ABBA_1
0.6005
p.S78T
EN
endometrium
COSMIC
LLLHSD
LIG_APCC_ABBA_1
0.6005
p.V79F
NCI-H747
large_intestine
COSMIC
LLLHSD
LIG_APCC_ABBA_1
0.7068
p.A67P
SNU-1040
large_intestine
COSMIC
LLLHSD
LIG_APCC_ABBA_1
0.1389
p.A64G
C2BBe1
large_intestine
COSMIC
LLLHSD
LIG_APCC_ABBA_1
0.0556
p.K78N
LS-411N
large_intestine
COSMIC
LLLHSD
LIG_APCC_ABBA_1
0.6918
Drug responses associated with SCFD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLLHSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WVM8
Sec1 family domain-containing protein 1
LIG_APCC_ABBA_1
74:79
LLLHSD
APC,CDC20,FZR1
0.5394
More...