DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LLPFGD
Uniprot ID:
O60706
Source protein:
ATP-binding cassette sub-family C member 9
Source gene:
ABCC9
Class:
LIG_APCC_ABBA_1
Location:
796:801
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9704
ASA_SCORE:
54.9333
COIL:
0.868
CONS_SCORE:
0.5395
DSS_SCORE:
0.3626
HELIX:
0.0917
FCONS_SCORE:
0.8784
RIG_SCORE:
0.8086
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F799I
TCGA-55-6968
LUAD
TCGA
LLPFGD
LIG_APCC_ABBA_1
0.7415
p.L797I
TCGA-77-8153
LUSC
TCGA
LLPFGD
LIG_APCC_ABBA_1
0.6063
p.D795E
TCGA-A5-A0G1
UCEC
TCGA
LLPFGD
LIG_APCC_ABBA_1
0.3056
p.L790R
TCGA-L5-A4OT
ESCA
TCGA
LLPFGD
LIG_APCC_ABBA_1
0.1667
p.G800A
TCGA-LN-A7HX
ESCA
TCGA
LLPFGD
LIG_APCC_ABBA_1
0.6429
p.L810V
DO50355
ESAD
ICGC
LLPFGD
LIG_APCC_ABBA_1
0.0833
p.Q792E
DO44419
HNSC
ICGC
LLPFGD
LIG_APCC_ABBA_1
0.2222
p.I796V
DO24245
LUAD
ICGC
LLPFGD
LIG_APCC_ABBA_1
0.7076
p.A789V
DO48900
PBCA
ICGC
LLPFGD
LIG_APCC_ABBA_1
0.1389
p.A789V
DO38807
STAD
ICGC
LLPFGD
LIG_APCC_ABBA_1
0.1389
p.A789V
DO41572
UCEC
ICGC
LLPFGD
LIG_APCC_ABBA_1
0.1389
p.F798L
DO46905
RECA
ICGC
LLPFGD
LIG_APCC_ABBA_1
0.6981
p.D807N
DO38099
SKCM
ICGC
LLPFGD
LIG_APCC_ABBA_1
0.1667
p.D807G
DO41020
UCEC
ICGC
LLPFGD
LIG_APCC_ABBA_1
0.1667
p.E807D
SIDM00726
Non-Small Cell Lung Carcinoma
GDSC
LLPFGD
LIG_APCC_ABBA_1
0.1667
p.E807D
ACH-000875
Lung Cancer
CCLE
LLPFGD
LIG_APCC_ABBA_1
0.1667
p.E807D
NCI-H2347
lung
COSMIC
LLPFGD
LIG_APCC_ABBA_1
0.1667
p.I810T
SIDM00228
Thyroid Gland Carcinoma
GDSC
LLPFGD
LIG_APCC_ABBA_1
0.0833
p.I810T
ACH-000897
Thyroid Cancer
CCLE
LLPFGD
LIG_APCC_ABBA_1
0.0833
p.Q802K
ACH-000779
Lung Cancer
CCLE
LLPFGD
LIG_APCC_ABBA_1
0.3056
Drug responses associated with ABCC9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLPFGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60706
ATP-binding cassette sub-family C member 9
LIG_APCC_ABBA_1
796:801
LLPFGD
APC,CDC20,FZR1
0.9704
More...