DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLPFQD
Uniprot ID:
Q8NE35
Source protein:
Cytoplasmic polyadenylation element-binding protein 3
Source gene:
CPEB3
Class:
LIG_APCC_ABBA_1
Location:
331:336
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.971
ASA_SCORE:
67.75
COIL:
0.719
CONS_SCORE:
0.387
DSS_SCORE:
0.4564
HELIX:
0.2118
FCONS_SCORE:
1.0497
RIG_SCORE:
0.7613
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L331V
TCGA-39-5035
LUSC
TCGA
LLPFQD
LIG_APCC_ABBA_1
0.5654
p.L331V
DO27310
LUSC
ICGC
LLPFQD
LIG_APCC_ABBA_1
0.5654
p.R337L
TCGA-D3-A2JO
SKCM
TCGA
LLPFQD
LIG_APCC_ABBA_1
0.3056
p.R337L
DO47619
SKCM
ICGC
LLPFQD
LIG_APCC_ABBA_1
0.3056
p.R337W
TCGA-T3-A92M
HNSC
TCGA
LLPFQD
LIG_APCC_ABBA_1
0.3056
p.R337W
DO223269
HNSC
ICGC
LLPFQD
LIG_APCC_ABBA_1
0.3056
p.N321T
DO8264
COAD
ICGC
LLPFQD
LIG_APCC_ABBA_1
0.0556
p.P340S
DO227979
COCA
ICGC
LLPFQD
LIG_APCC_ABBA_1
0.2222
p.A322D
DO229045
LICA
ICGC
LLPFQD
LIG_APCC_ABBA_1
0.0833
p.A322T
DO229126
NKTL
ICGC
LLPFQD
LIG_APCC_ABBA_1
0.0833
p.G328S
DO229502
SKCA
ICGC
LLPFQD
LIG_APCC_ABBA_1
0.25
p.N330T
SIDM01141
Ovarian Carcinoma
GDSC
LLPFQD
LIG_APCC_ABBA_1
0.3056
p.N330T
ACH-000291
Ovarian Cancer
CCLE
LLPFQD
LIG_APCC_ABBA_1
0.3056
p.T343A
SIDM00217
Colorectal Carcinoma
GDSC
LLPFQD
LIG_APCC_ABBA_1
0.1389
p.T343A
ACH-000999
Colon/Colorectal Cancer
CCLE
LLPFQD
LIG_APCC_ABBA_1
0.1389
p.T343A
SNU-1040
large_intestine
COSMIC
LLPFQD
LIG_APCC_ABBA_1
0.1389
Drug responses associated with CPEB3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLPFQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NE35
Cytoplasmic polyadenylation element-binding protein 3
LIG_APCC_ABBA_1
331:336
LLPFQD
APC,CDC20,FZR1
0.971
More...