DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLPHAD
Uniprot ID:
Q9C091
Source protein:
GREB1-like protein
Source gene:
GREB1L
Class:
LIG_APCC_ABBA_1
Location:
1256:1261
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.662
ASA_SCORE:
59.9167
COIL:
0.759
CONS_SCORE:
0.7214
DSS_SCORE:
0.2093
HELIX:
0.1755
FCONS_SCORE:
1.3281
RIG_SCORE:
0.7171
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1261G
TCGA-AA-A00N
COAD
TCGA
LLPHAD
LIG_APCC_ABBA_1
0.7198
p.D1261G
DO9876
COAD
ICGC
LLPHAD
LIG_APCC_ABBA_1
0.7198
p.R1269W
TCGA-CI-6622
READ
TCGA
LLPHAD
LIG_APCC_ABBA_1
0.1111
p.R1269W
DO36435
READ
ICGC
LLPHAD
LIG_APCC_ABBA_1
0.1111
p.P1251S
TCGA-QG-A5Z2
COAD
TCGA
LLPHAD
LIG_APCC_ABBA_1
0.1944
p.P1251S
DO44096
COAD
ICGC
LLPHAD
LIG_APCC_ABBA_1
0.1944
p.A1260S
DO228952
LICA
ICGC
LLPHAD
LIG_APCC_ABBA_1
0.6477
p.V1265L
DO228952
LICA
ICGC
LLPHAD
LIG_APCC_ABBA_1
0.2222
p.G1248D
DO36556
READ
ICGC
LLPHAD
LIG_APCC_ABBA_1
0.1111
p.V1262M
SIDM01293
Colorectal Carcinoma
GDSC
LLPHAD
LIG_APCC_ABBA_1
0.3056
p.A1263G
SIDM01095
Rhabdomyosarcoma
GDSC
LLPHAD
LIG_APCC_ABBA_1
0.2778
p.A1263G
SIDM00027
Kidney Carcinoma
GDSC
LLPHAD
LIG_APCC_ABBA_1
0.2778
p.A1263G
SIDM00736
Non-Cancerous
GDSC
LLPHAD
LIG_APCC_ABBA_1
0.2778
p.D1261N
SIDM00007
Other Solid Cancers
GDSC
LLPHAD
LIG_APCC_ABBA_1
0.6932
p.D1261N
MCC13
skin
COSMIC
LLPHAD
LIG_APCC_ABBA_1
0.6932
p.P1258L
SIDM00284
Melanoma
GDSC
LLPHAD
LIG_APCC_ABBA_1
0.6471
p.P1258L
ACH-000805
Skin Cancer
CCLE
LLPHAD
LIG_APCC_ABBA_1
0.6471
p.S1255F
SIDM00380
Acute Myeloid Leukemia
GDSC
LLPHAD
LIG_APCC_ABBA_1
0.3056
p.S1255F
ACH-000373
Leukemia
CCLE
LLPHAD
LIG_APCC_ABBA_1
0.3056
p.S1255F
SKM-1
haematopoietic_and_lymphoid_tissue
COSMIC
LLPHAD
LIG_APCC_ABBA_1
0.3056
p.V1265M
ACH-000698
Lung Cancer
CCLE
LLPHAD
LIG_APCC_ABBA_1
0.2222
p.S1254C
ACH-001422
Prostate Cancer
CCLE
LLPHAD
LIG_APCC_ABBA_1
0.2778
p.S1254R
HT
haematopoietic_and_lymphoid_tissue
COSMIC
LLPHAD
LIG_APCC_ABBA_1
0.2778
Drug responses associated with GREB1L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLPHAD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C091
GREB1-like protein
LIG_APCC_ABBA_1
1256:1261
LLPHAD
APC,CDC20,FZR1
0.662
More...