DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLPHSD
Uniprot ID:
Q8N139
Source protein:
ATP-binding cassette sub-family A member 6
Source gene:
ABCA6
Class:
LIG_APCC_ABBA_1
Location:
1610:1615
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8934
ASA_SCORE:
109.5833
COIL:
0.8397
CONS_SCORE:
0.2377
DSS_SCORE:
0.7178
HELIX:
0.1412
FCONS_SCORE:
1.0994
RIG_SCORE:
0.7323
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M1606T
TCGA-AA-3845
COAD
TCGA
LLPHSD
LIG_APCC_ABBA_1
0.2222
p.M1606T
DO10020
COAD
ICGC
LLPHSD
LIG_APCC_ABBA_1
0.2222
p.K1609E
TCGA-AP-A0LM
UCEC
TCGA
LLPHSD
LIG_APCC_ABBA_1
0.3056
p.K1609E
DO43306
UCEC
ICGC
LLPHSD
LIG_APCC_ABBA_1
0.3056
p.E1601K
TCGA-B5-A0JY
UCEC
TCGA
LLPHSD
LIG_APCC_ABBA_1
0.0833
p.E1601K
DO43041
UCEC
ICGC
LLPHSD
LIG_APCC_ABBA_1
0.0833
p.D1603H
TCGA-NC-A5HN
LUSC
TCGA
LLPHSD
LIG_APCC_ABBA_1
0.1389
p.D1603H
DO52025
LUSC
ICGC
LLPHSD
LIG_APCC_ABBA_1
0.1389
Drug responses associated with ABCA6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLPHSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N139
ATP-binding cassette sub-family A member 6
LIG_APCC_ABBA_1
1610:1615
LLPHSD
APC,CDC20,FZR1
0.8934
More...