DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLPHSD
Uniprot ID:
Q8N139
Source protein:
ATP-binding cassette sub-family A member 6
Source gene:
ABCA6
Class:
LIG_APCC_ABBA_1
Location:
1610:1615
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8934
ASA_SCORE:
109.5833
COIL:
0.8397
CONS_SCORE:
0.2377
DSS_SCORE:
0.7178
HELIX:
0.1412
FCONS_SCORE:
1.0994
RIG_SCORE:
0.7323
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K1609E
TCGA-AP-A0LM
UCEC
TCGA
LLPHSD
LIG_APCC_ABBA_1
0.3056
p.K1609E
DO43306
UCEC
ICGC
LLPHSD
LIG_APCC_ABBA_1
0.3056
p.M1606T
TCGA-AA-3845
COAD
TCGA
LLPHSD
LIG_APCC_ABBA_1
0.2222
p.M1606T
DO10020
COAD
ICGC
LLPHSD
LIG_APCC_ABBA_1
0.2222
p.D1603H
TCGA-NC-A5HN
LUSC
TCGA
LLPHSD
LIG_APCC_ABBA_1
0.1389
p.D1603H
DO52025
LUSC
ICGC
LLPHSD
LIG_APCC_ABBA_1
0.1389
p.E1601K
TCGA-B5-A0JY
UCEC
TCGA
LLPHSD
LIG_APCC_ABBA_1
0.0833
p.E1601K
DO43041
UCEC
ICGC
LLPHSD
LIG_APCC_ABBA_1
0.0833
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Drug responses associated with ABCA6 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of LLPHSD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N139
ATP-binding cassette sub-family A member 6
LIG_APCC_ABBA_1
1610:1615
LLPHSD
APC,CDC20,FZR1
0.8934
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