DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LLR
Uniprot ID:
P61923
Source protein:
Coatomer subunit zeta-1
Source gene:
COPZ1
Class:
DEG_APCC_TPR_1
Location:
175:177
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7029
ASA_SCORE:
117.6333
COIL:
0.6623
CONS_SCORE:
0.6201
DSS_SCORE:
0.7297
HELIX:
0.352
FCONS_SCORE:
1.0398
RIG_SCORE:
0.8372
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R177P
TCGA-04-1648
OV
TCGA
LLR
DEG_APCC_TPR_1
0.7512
p.A167V
TCGA-AM-5821
COAD
TCGA
LLR
DEG_APCC_TPR_1
0.1111
p.K172E
TCGA-CN-6010
HNSC
TCGA
LLR
DEG_APCC_TPR_1
0.6944
p.E169K
TCGA-CV-7418
HNSC
TCGA
LLR
DEG_APCC_TPR_1
0.1667
p.I171M
TCGA-EO-A3AS
UCEC
TCGA
LLR
DEG_APCC_TPR_1
0.2222
p.A175T
SIDM01016
T-Lymphoblastic Leukemia
GDSC
LLR
DEG_APCC_TPR_1
0.7139
p.A175T
SIDM01263
T-Lymphoblastic Leukemia
GDSC
LLR
DEG_APCC_TPR_1
0.7139
p.A175T
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LLR
DEG_APCC_TPR_1
0.7139
p.A167T
ACH-000995
Leukemia
CCLE
LLR
DEG_APCC_TPR_1
0.1111
p.A167T
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LLR
DEG_APCC_TPR_1
0.1111
p.W173S
ACH-001852
Bile Duct Cancer
CCLE
LLR
DEG_APCC_TPR_1
0.2778
p.L176F
Mewo
skin
COSMIC
LLR
DEG_APCC_TPR_1
0.6981
Drug responses associated with COPZ1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P61923
Coatomer subunit zeta-1
DEG_APCC_TPR_1
175:177
LLR
APC,CDC20,FZR1
0.7029
More...