DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLTPKDS
Uniprot ID:
Q86XP3
Source protein:
ATP-dependent RNA helicase DDX42
Source gene:
DDX42
Class:
DEG_SCF_FBW7_1
Location:
601:607
E3 ligase:
FBXW7
DEGRON score:
0.6388
ASA_SCORE:
46.0571
COIL:
0.462
CONS_SCORE:
0.4626
DSS_SCORE:
0.3033
HELIX:
0.3617
FCONS_SCORE:
0.7823
RIG_SCORE:
0.7914
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G593S
TCGA-AN-A0AK
BRCA
TCGA
LLTPKDS
DEG_SCF_FBW7_1
0.1111
p.R615Q
TCGA-AP-A0LM
UCEC
TCGA
LLTPKDS
DEG_SCF_FBW7_1
0.1111
p.R615L
TCGA-DD-A1EE
LIHC
TCGA
LLTPKDS
DEG_SCF_FBW7_1
0.1111
p.R615L
TCGA-G3-A25Z
LIHC
TCGA
LLTPKDS
DEG_SCF_FBW7_1
0.1111
p.H591N
DO8730
COAD
ICGC
LLTPKDS
DEG_SCF_FBW7_1
0.0556
p.F592C
DO50811
LIRI
ICGC
LLTPKDS
DEG_SCF_FBW7_1
0.0833
p.A607D
DO23986
LUAD
ICGC
LLTPKDS
DEG_SCF_FBW7_1
0.7793
p.G611W
DO37886
SKCM
ICGC
LLTPKDS
DEG_SCF_FBW7_1
0.2222
p.A606V
DO43049
UCEC
ICGC
LLTPKDS
DEG_SCF_FBW7_1
0.6936
Drug responses associated with DDX42 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLTPKDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86XP3
ATP-dependent RNA helicase DDX42
DEG_SCF_FBW7_1
601:607
LLTPKDS
FBXW7
0.6388
More...