DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLTPLIS
Uniprot ID:
O94967
Source protein:
WD repeat-containing protein 47
Source gene:
WDR47
Class:
DEG_SCF_FBW7_1
Location:
283:289
E3 ligase:
FBXW7
DEGRON score:
0.9859
ASA_SCORE:
67.0857
COIL:
0.7493
CONS_SCORE:
0.4704
DSS_SCORE:
0.2293
HELIX:
0.1437
FCONS_SCORE:
1.2321
RIG_SCORE:
0.8154
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A288V
TCGA-06-5416
GBM
TCGA
LLTPLIS
DEG_SCF_FBW7_1
0.6936
p.T292I
TCGA-14-0867
GBM
TCGA
LLTPLIS
DEG_SCF_FBW7_1
0.6944
p.L291V
TCGA-BH-A1FG
BRCA
TCGA
LLTPLIS
DEG_SCF_FBW7_1
0.2778
p.L294R
TCGA-CA-6717
COAD
TCGA
LLTPLIS
DEG_SCF_FBW7_1
0.1944
p.H275N
TCGA-MV-A51V
BLCA
TCGA
LLTPLIS
DEG_SCF_FBW7_1
0.1111
p.V276F
TCGA-NC-A5HR
LUSC
TCGA
LLTPLIS
DEG_SCF_FBW7_1
0.1389
p.Q275R
DO52318
LIHC
ICGC
LLTPLIS
DEG_SCF_FBW7_1
0.1111
p.S284F
DO37487
SKCM
ICGC
LLTPLIS
DEG_SCF_FBW7_1
0.7982
p.R283H
DO47981
STAD
ICGC
LLTPLIS
DEG_SCF_FBW7_1
0.8244
p.R283H
DO52409
UCEC
ICGC
LLTPLIS
DEG_SCF_FBW7_1
0.8244
p.R283H
DO43891
UCEC
ICGC
LLTPLIS
DEG_SCF_FBW7_1
0.8244
p.L289F
IGROV-1
ovary
COSMIC
LLTPLIS
DEG_SCF_FBW7_1
0.6981
p.L289F
NCI-H510A
lung
COSMIC
LLTPLIS
DEG_SCF_FBW7_1
0.6981
Drug responses associated with WDR47 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLTPLIS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94967
WD repeat-containing protein 47
DEG_SCF_FBW7_1
283:289
LLTPLIS
FBXW7
0.9859
More...