DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LLVFCE
Uniprot ID:
P16885
Source protein:
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2
Source gene:
PLCG2
Class:
LIG_APCC_ABBA_1
Location:
1180:1185
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6083
ASA_SCORE:
20.3667
COIL:
0.014
CONS_SCORE:
0.5496
DSS_SCORE:
0.0807
HELIX:
0.0022
FCONS_SCORE:
1.3725
RIG_SCORE:
0.9161
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1182L
TCGA-CR-7402
HNSC
TCGA
LLVFCE
LIG_APCC_ABBA_1
0.5654
p.V1182L
DO15727
HNSC
ICGC
LLVFCE
LIG_APCC_ABBA_1
0.5654
p.R1187W
TCGA-28-1757
GBM
TCGA
LLVFCE
LIG_APCC_ABBA_1
0.2778
p.R1187W
DO12166
GBM
ICGC
LLVFCE
LIG_APCC_ABBA_1
0.2778
p.R1187W
DO23108
LINC
ICGC
LLVFCE
LIG_APCC_ABBA_1
0.2778
p.A1178T
DO220891
MELA
ICGC
LLVFCE
LIG_APCC_ABBA_1
0.2778
p.R1187Q
DO222395
MELA
ICGC
LLVFCE
LIG_APCC_ABBA_1
0.2778
p.R1187Q
SIDM00929
Chondrosarcoma
GDSC
LLVFCE
LIG_APCC_ABBA_1
0.2778
p.R1187Q
ACH-000516
Bone Cancer
CCLE
LLVFCE
LIG_APCC_ABBA_1
0.2778
p.R1187Q
CAL-78
bone
COSMIC
LLVFCE
LIG_APCC_ABBA_1
0.2778
p.E1176D
DO234222
ESAD
ICGC
LLVFCE
LIG_APCC_ABBA_1
0.2222
p.S1172T
DO222884
COCA
ICGC
LLVFCE
LIG_APCC_ABBA_1
0.1111
p.E1194D
TCGA-AA-3510
COAD
TCGA
LLVFCE
LIG_APCC_ABBA_1
0.0833
p.E1194D
DO7783
COAD
ICGC
LLVFCE
LIG_APCC_ABBA_1
0.0833
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Drug responses associated with PLCG2 mutations
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Mutation (In Degron?)
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All proteins holding degron of LLVFCE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P16885
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2
LIG_APCC_ABBA_1
1180:1185
LLVFCE
APC,CDC20,FZR1
0.6083
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