DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LLVFWD
Uniprot ID:
Q96FK6
Source protein:
WD repeat-containing protein 89
Source gene:
WDR89
Class:
LIG_APCC_ABBA_1
Location:
142:147
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8731
ASA_SCORE:
9.5833
COIL:
0.0573
CONS_SCORE:
0.5596
DSS_SCORE:
0.1605
HELIX:
0.0048
FCONS_SCORE:
1.333
RIG_SCORE:
0.9714
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A132S
TCGA-05-4424
LUAD
TCGA
LLVFWD
LIG_APCC_ABBA_1
0.0556
p.A132S
DO23672
LUAD
ICGC
LLVFWD
LIG_APCC_ABBA_1
0.0556
p.E135D
TCGA-AJ-A5DW
UCEC
TCGA
LLVFWD
LIG_APCC_ABBA_1
0.1389
p.E135D
DO50075
UCEC
ICGC
LLVFWD
LIG_APCC_ABBA_1
0.1389
p.A141V
TCGA-AP-A051
UCEC
TCGA
LLVFWD
LIG_APCC_ABBA_1
0.3056
p.A141V
TCGA-BS-A0UV
UCEC
TCGA
LLVFWD
LIG_APCC_ABBA_1
0.3056
p.A141V
DO42793
UCEC
ICGC
LLVFWD
LIG_APCC_ABBA_1
0.3056
p.A141V
DO42673
UCEC
ICGC
LLVFWD
LIG_APCC_ABBA_1
0.3056
p.S152Y
TCGA-AX-A2HC
UCEC
TCGA
LLVFWD
LIG_APCC_ABBA_1
0.1944
p.S152Y
DO41572
UCEC
ICGC
LLVFWD
LIG_APCC_ABBA_1
0.1944
p.R149M
TCGA-D3-A3CE
SKCM
TCGA
LLVFWD
LIG_APCC_ABBA_1
0.2778
p.R149M
DO37405
SKCM
ICGC
LLVFWD
LIG_APCC_ABBA_1
0.2778
p.L142W
TCGA-LK-A4O6
MESO
TCGA
LLVFWD
LIG_APCC_ABBA_1
0.7015
p.L142W
TCGA-SC-A6LP
MESO
TCGA
LLVFWD
LIG_APCC_ABBA_1
0.7015
p.A148V
TCGA-NH-A5IV
COAD
TCGA
LLVFWD
LIG_APCC_ABBA_1
0.3056
p.A148V
DO49095
COAD
ICGC
LLVFWD
LIG_APCC_ABBA_1
0.3056
p.V144G
SIDM01078
Small Cell Lung Carcinoma
GDSC
LLVFWD
LIG_APCC_ABBA_1
0.7532
p.V144G
ACH-000790
Lung Cancer
CCLE
LLVFWD
LIG_APCC_ABBA_1
0.7532
p.V144G
SHP-77
lung
COSMIC
LLVFWD
LIG_APCC_ABBA_1
0.7532
Drug responses associated with WDR89 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLVFWD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96FK6
WD repeat-containing protein 89
LIG_APCC_ABBA_1
142:147
LLVFWD
APC,CDC20,FZR1
0.8731
More...