DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LLWTPPPT
Uniprot ID:
Q96K30
Source protein:
RBPJ-interacting and tubulin-associated protein 1
Source gene:
RITA1
Class:
DEG_SCF_FBW7_1
Location:
140:147
E3 ligase:
FBXW7
DEGRON score:
0.9985
ASA_SCORE:
58.9625
COIL:
0.7638
CONS_SCORE:
0.5896
DSS_SCORE:
0.6338
HELIX:
0.0324
FCONS_SCORE:
1.3675
RIG_SCORE:
0.6623
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R155C
TCGA-CD-8536
STAD
TCGA
LLWTPPPT
DEG_SCF_FBW7_1
0.1111
p.G150V
TCGA-LG-A6GG
LIHC
TCGA
LLWTPPPT
DEG_SCF_FBW7_1
0.25
p.A146T
SIDM00216
Colorectal Carcinoma
GDSC
LLWTPPPT
DEG_SCF_FBW7_1
0.7139
p.A146T
SNU-175
large_intestine
COSMIC
LLWTPPPT
DEG_SCF_FBW7_1
0.7139
p.R152W
SIDM01016
T-Lymphoblastic Leukemia
GDSC
LLWTPPPT
DEG_SCF_FBW7_1
0.1944
p.R152W
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LLWTPPPT
DEG_SCF_FBW7_1
0.1944
p.R152Q
SIDM00217
Colorectal Carcinoma
GDSC
LLWTPPPT
DEG_SCF_FBW7_1
0.1944
p.R152Q
SNU-1040
large_intestine
COSMIC
LLWTPPPT
DEG_SCF_FBW7_1
0.1944
p.P131L
SIDM01615
Non-Small Cell Lung Carcinoma
GDSC
LLWTPPPT
DEG_SCF_FBW7_1
0.1944
Drug responses associated with RITA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLWTPPPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96K30
RBPJ-interacting and tubulin-associated protein 1
DEG_SCF_FBW7_1
140:147
LLWTPPPT
FBXW7
0.9985
More...