DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LMATPNLS
Uniprot ID:
Q9UPQ3
Source protein:
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1
Source gene:
AGAP1
Class:
DEG_SCF_FBW7_1
Location:
833:840
E3 ligase:
FBXW7
DEGRON score:
0.998
ASA_SCORE:
61.5375
COIL:
0.7324
CONS_SCORE:
0.3174
DSS_SCORE:
0.3976
HELIX:
0.1986
FCONS_SCORE:
1.0029
RIG_SCORE:
0.8012
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P837S
TCGA-AX-A2HD
UCEC
TCGA
LMATPNLS
DEG_SCF_FBW7_1
0.6752
p.P837S
DO42608
UCEC
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.6752
p.R846Q
TCGA-BR-8487
STAD
TCGA
LMATPNLS
DEG_SCF_FBW7_1
0.1667
p.R846Q
TCGA-EE-A2GO
SKCM
TCGA
LMATPNLS
DEG_SCF_FBW7_1
0.1667
p.R846Q
DO50970
LICA
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.1667
p.R846Q
DO37823
SKCM
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.1667
p.R846Q
DO47867
STAD
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.1667
p.L833F
TCGA-CA-6717
COAD
TCGA
LMATPNLS
DEG_SCF_FBW7_1
0.6981
p.L833F
DO8264
COAD
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.6981
p.E829K
TCGA-D3-A5GU
SKCM
TCGA
LMATPNLS
DEG_SCF_FBW7_1
0.2222
p.E829K
DO47584
SKCM
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.2222
p.V832M
TCGA-D5-6928
COAD
TCGA
LMATPNLS
DEG_SCF_FBW7_1
0.3056
p.V832M
DO7776
COAD
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.3056
p.V832M
DO234199
ESAD
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.3056
p.V832M
SIDM01653
Non-Cancerous
GDSC
LMATPNLS
DEG_SCF_FBW7_1
0.3056
p.V832M
SIDM00207
Glioblastoma
GDSC
LMATPNLS
DEG_SCF_FBW7_1
0.3056
p.V832M
SIDM00217
Colorectal Carcinoma
GDSC
LMATPNLS
DEG_SCF_FBW7_1
0.3056
p.V832M
SIDM01394
Kidney Carcinoma
GDSC
LMATPNLS
DEG_SCF_FBW7_1
0.3056
p.N845D
TCGA-DD-A4NN
LIHC
TCGA
LMATPNLS
DEG_SCF_FBW7_1
0.1944
p.N845D
DO44970
LIHC
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.1944
p.P837H
TCGA-FS-A1ZM
SKCM
TCGA
LMATPNLS
DEG_SCF_FBW7_1
0.7694
p.P837H
DO37731
SKCM
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.7694
p.N848S
TCGA-RC-A6M6
LIHC
TCGA
LMATPNLS
DEG_SCF_FBW7_1
0.1111
p.N848S
DO223917
LIHC
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.1111
p.G825V
DO228978
LICA
ICGC
LMATPNLS
DEG_SCF_FBW7_1
0.1111
p.R830H
SIDM01300
Colorectal Carcinoma
GDSC
LMATPNLS
DEG_SCF_FBW7_1
0.25
p.Y824C
SIDM01045
Endometrial Carcinoma
GDSC
LMATPNLS
DEG_SCF_FBW7_1
0.0833
p.Y824C
EN
endometrium
COSMIC
LMATPNLS
DEG_SCF_FBW7_1
0.0833
p.N838S
SIDM01743
Melanoma
GDSC
LMATPNLS
DEG_SCF_FBW7_1
0.5958
p.S834C
PCI-15A
upper_aerodigestive_tract
COSMIC
LMATPNLS
DEG_SCF_FBW7_1
0.7541
Drug responses associated with AGAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LMATPNLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPQ3
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1
DEG_SCF_FBW7_1
833:840
LMATPNLS
FBXW7
0.998
More...