DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LMGTPDGT
Uniprot ID:
P27708
Source protein:
CAD protein [Includes: Glutamine-dependent carbamoyl-phosphate synthase
Source gene:
CAD
Class:
DEG_SCF_FBW7_1
Location:
1881:1888
E3 ligase:
FBXW7
DEGRON score:
0.9985
ASA_SCORE:
73.1875
COIL:
0.8779
CONS_SCORE:
0.2019
DSS_SCORE:
0.702
HELIX:
0.0864
FCONS_SCORE:
1.0398
RIG_SCORE:
0.5827
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1881P
TCGA-AX-A0J0
UCEC
TCGA
LMGTPDGT
DEG_SCF_FBW7_1
0.6471
p.G1883R
TCGA-B5-A11E
UCEC
TCGA
LMGTPDGT
DEG_SCF_FBW7_1
0.6457
p.G1887C
TCGA-G4-6320
COAD
TCGA
LMGTPDGT
DEG_SCF_FBW7_1
0.6489
p.R1874Q
TCGA-W3-AA1V
SKCM
TCGA
LMGTPDGT
DEG_SCF_FBW7_1
0.1389
p.R1892W
DO5088
BRCA
ICGC
LMGTPDGT
DEG_SCF_FBW7_1
0.2222
p.R1885C
DO8858
COAD
ICGC
LMGTPDGT
DEG_SCF_FBW7_1
0.8301
p.R1885C
DO42608
UCEC
ICGC
LMGTPDGT
DEG_SCF_FBW7_1
0.8301
p.E1891K
DO229177
LMS
ICGC
LMGTPDGT
DEG_SCF_FBW7_1
0.25
p.S1893G
DO42673
UCEC
ICGC
LMGTPDGT
DEG_SCF_FBW7_1
0.1944
p.V1895I
SIDM00491
Thyroid Gland Carcinoma
GDSC
LMGTPDGT
DEG_SCF_FBW7_1
0.1389
p.V1895I
SIDM00544
Neuroblastoma
GDSC
LMGTPDGT
DEG_SCF_FBW7_1
0.1389
p.V1895I
GOTO
autonomic_ganglia
COSMIC
LMGTPDGT
DEG_SCF_FBW7_1
0.1389
p.V1895I
ASH-3
thyroid
COSMIC
LMGTPDGT
DEG_SCF_FBW7_1
0.1389
p.Y1890C
SIDM00364
B-Lymphoblastic Leukemia
GDSC
LMGTPDGT
DEG_SCF_FBW7_1
0.7222
p.Y1890C
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
LMGTPDGT
DEG_SCF_FBW7_1
0.7222
p.P1891H
SIDM00282
Colorectal Carcinoma
GDSC
LMGTPDGT
DEG_SCF_FBW7_1
0.25
p.P1891H
CW-2
large_intestine
COSMIC
LMGTPDGT
DEG_SCF_FBW7_1
0.25
p.P1896S
Sarc9371
bone
COSMIC
LMGTPDGT
DEG_SCF_FBW7_1
0.1111
Drug responses associated with CAD mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LMGTPDGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P27708
CAD protein [Includes: Glutamine-dependent carbamoyl-phosphate synthase
DEG_SCF_FBW7_1
1881:1888
LMGTPDGT
FBXW7
0.9985
More...