DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LMLHSD
Uniprot ID:
O75420
Source protein:
GRB10-interacting GYF protein 1
Source gene:
GIGYF1
Class:
LIG_APCC_ABBA_1
Location:
1009:1014
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5973
ASA_SCORE:
83.5667
COIL:
0.7152
CONS_SCORE:
0.3776
DSS_SCORE:
0.404
HELIX:
0.0727
FCONS_SCORE:
0.9889
RIG_SCORE:
0.7332
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G999V
TCGA-EE-A3AG
SKCM
TCGA
LMLHSD
LIG_APCC_ABBA_1
0.0556
p.G999V
DO37471
SKCM
ICGC
LMLHSD
LIG_APCC_ABBA_1
0.0556
p.K1005N
TCGA-EY-A215
UCEC
TCGA
LMLHSD
LIG_APCC_ABBA_1
0.3333
p.K1005N
DO42665
UCEC
ICGC
LMLHSD
LIG_APCC_ABBA_1
0.3333
p.G999R
TCGA-WS-AB45
COAD
TCGA
LMLHSD
LIG_APCC_ABBA_1
0.0556
p.G999R
DO51734
COAD
ICGC
LMLHSD
LIG_APCC_ABBA_1
0.0556
p.G999R
DO229248
THCA
ICGC
LMLHSD
LIG_APCC_ABBA_1
0.0556
p.H1012N
DO228952
LICA
ICGC
LMLHSD
LIG_APCC_ABBA_1
0.7423
p.P1015T
DO228974
LICA
ICGC
LMLHSD
LIG_APCC_ABBA_1
0.3056
p.P1015T
DO229026
LICA
ICGC
LMLHSD
LIG_APCC_ABBA_1
0.3056
Drug responses associated with GIGYF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LMLHSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75420
GRB10-interacting GYF protein 1
LIG_APCC_ABBA_1
1009:1014
LMLHSD
APC,CDC20,FZR1
0.5973
More...