DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LMR
Uniprot ID:
Q5VZM2
Source protein:
Ras-related GTP-binding protein B
Source gene:
RRAGB
Class:
DEG_APCC_TPR_1
Location:
372:374
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7903
ASA_SCORE:
123.9667
COIL:
0.7243
CONS_SCORE:
0.2183
DSS_SCORE:
0.8211
HELIX:
0.1467
FCONS_SCORE:
0.8034
RIG_SCORE:
0.8222
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R374H
TCGA-32-2616
GBM
TCGA
LMR
DEG_APCC_TPR_1
0.8244
p.R374P
TCGA-69-7980
LUAD
TCGA
LMR
DEG_APCC_TPR_1
0.7512
p.G366E
TCGA-AA-3715
COAD
TCGA
LMR
DEG_APCC_TPR_1
0.1667
p.D365N
TCGA-FD-A3SO
BLCA
TCGA
LMR
DEG_APCC_TPR_1
0.1389
p.R374C
SIDM00217
Colorectal Carcinoma
GDSC
LMR
DEG_APCC_TPR_1
0.8301
p.R374C
SNU-1040
large_intestine
COSMIC
LMR
DEG_APCC_TPR_1
0.8301
Drug responses associated with RRAGB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LMR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VZM2
Ras-related GTP-binding protein B
DEG_APCC_TPR_1
372:374
LMR
APC,CDC20,FZR1
0.7903
More...