DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LMSTPVAS
Uniprot ID:
Q6P5X7
Source protein:
Transmembrane protein 71
Source gene:
TMEM71
Class:
DEG_SCF_FBW7_1
Location:
7:14
E3 ligase:
FBXW7
DEGRON score:
0.9303
ASA_SCORE:
67.65
COIL:
0.7494
CONS_SCORE:
0.7574
DSS_SCORE:
0.3659
HELIX:
0.1743
FCONS_SCORE:
1.518
RIG_SCORE:
0.7315
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q6E
TCGA-05-4397
LUAD
TCGA
LMSTPVAS
DEG_SCF_FBW7_1
0.3056
p.Q6E
TCGA-AR-A250
BRCA
TCGA
LMSTPVAS
DEG_SCF_FBW7_1
0.3056
p.Q6E
TCGA-GV-A3JZ
BLCA
TCGA
LMSTPVAS
DEG_SCF_FBW7_1
0.3056
p.Q6E
DO773
BLCA
ICGC
LMSTPVAS
DEG_SCF_FBW7_1
0.3056
p.Q6E
DO1802
BRCA
ICGC
LMSTPVAS
DEG_SCF_FBW7_1
0.3056
p.Q6E
DO25320
LUAD
ICGC
LMSTPVAS
DEG_SCF_FBW7_1
0.3056
p.R3Q
TCGA-B5-A0JY
UCEC
TCGA
LMSTPVAS
DEG_SCF_FBW7_1
0.2222
p.R3Q
TCGA-SW-A7EB
STAD
TCGA
LMSTPVAS
DEG_SCF_FBW7_1
0.2222
p.R3Q
DO220895
MELA
ICGC
LMSTPVAS
DEG_SCF_FBW7_1
0.2222
p.R3Q
DO50143
STAD
ICGC
LMSTPVAS
DEG_SCF_FBW7_1
0.2222
p.R3Q
DO43041
UCEC
ICGC
LMSTPVAS
DEG_SCF_FBW7_1
0.2222
p.G24R
DO222494
MELA
ICGC
LMSTPVAS
DEG_SCF_FBW7_1
0.0556
p.R3L
SIDM00660
Colorectal Carcinoma
GDSC
LMSTPVAS
DEG_SCF_FBW7_1
0.2222
p.R3L
ACH-000985
Colon/Colorectal Cancer
CCLE
LMSTPVAS
DEG_SCF_FBW7_1
0.2222
p.R3L
LS-411N
large_intestine
COSMIC
LMSTPVAS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with TMEM71 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LMSTPVAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6P5X7
Transmembrane protein 71
DEG_SCF_FBW7_1
7:14
LMSTPVAS
FBXW7
0.9303
More...