DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LMTPPIS
Uniprot ID:
Q8HWS3
Source protein:
DNA-binding protein RFX6
Source gene:
RFX6
Class:
DEG_SCF_FBW7_1
Location:
640:646
E3 ligase:
FBXW7
DEGRON score:
0.9524
ASA_SCORE:
68.3143
COIL:
0.9139
CONS_SCORE:
0.3159
DSS_SCORE:
0.4999
HELIX:
0.0311
FCONS_SCORE:
1.072
RIG_SCORE:
0.6915
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G638S
TCGA-A8-A08X
BRCA
TCGA
LMTPPIS
DEG_SCF_FBW7_1
0.2778
p.G638S
DO2347
BRCA
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.2778
p.S646Y
TCGA-AA-3510
COAD
TCGA
LMTPPIS
DEG_SCF_FBW7_1
0.712
p.S646Y
DO7783
COAD
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.712
p.L633I
TCGA-AX-A2HC
UCEC
TCGA
LMTPPIS
DEG_SCF_FBW7_1
0.1389
p.L633I
DO41572
UCEC
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.1389
p.H639N
TCGA-CX-7086
HNSC
TCGA
LMTPPIS
DEG_SCF_FBW7_1
0.3056
p.H639N
DO15046
HNSC
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.3056
p.H639N
SIDM00392
Melanoma
GDSC
LMTPPIS
DEG_SCF_FBW7_1
0.3056
p.H639N
ACH-000810
Skin Cancer
CCLE
LMTPPIS
DEG_SCF_FBW7_1
0.3056
p.H639N
SK-MEL-30
skin
COSMIC
LMTPPIS
DEG_SCF_FBW7_1
0.3056
p.S646P
TCGA-DI-A1BU
UCEC
TCGA
LMTPPIS
DEG_SCF_FBW7_1
0.6752
p.S646P
DO42023
UCEC
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.6752
p.P644S
TCGA-EE-A29V
SKCM
TCGA
LMTPPIS
DEG_SCF_FBW7_1
0.5641
p.P644S
DO38006
SKCM
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.5641
p.E632K
TCGA-WE-A8K5
SKCM
TCGA
LMTPPIS
DEG_SCF_FBW7_1
0.1111
p.E632K
DO51282
SKCM
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.1111
p.M631T
DO234288
ESAD
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.0833
p.H639Y
DO48292
ESCA
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.3056
p.A637S
DO228330
LICA
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.25
p.G638V
DO229015
LICA
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.2778
p.G638V
SIDM01118
Small Cell Lung Carcinoma
GDSC
LMTPPIS
DEG_SCF_FBW7_1
0.2778
p.G638V
ACH-002175
Lung Cancer
CCLE
LMTPPIS
DEG_SCF_FBW7_1
0.2778
p.G638V
NCI-H740
lung
COSMIC
LMTPPIS
DEG_SCF_FBW7_1
0.2778
p.V655I
DO221125
MALY
ICGC
LMTPPIS
DEG_SCF_FBW7_1
0.0833
p.P647S
SIDM00973
Melanoma
GDSC
LMTPPIS
DEG_SCF_FBW7_1
0.3056
p.P647S
ACH-000827
Skin Cancer
CCLE
LMTPPIS
DEG_SCF_FBW7_1
0.3056
p.P647S
WM793B
skin
COSMIC
LMTPPIS
DEG_SCF_FBW7_1
0.3056
p.H639L
SIDM00951
T-Lymphoblastic Leukemia
GDSC
LMTPPIS
DEG_SCF_FBW7_1
0.3056
p.H639L
ACH-002222
Leukemia
CCLE
LMTPPIS
DEG_SCF_FBW7_1
0.3056
p.H639L
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
LMTPPIS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with RFX6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LMTPPIS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8HWS3
DNA-binding protein RFX6
DEG_SCF_FBW7_1
640:646
LMTPPIS
FBXW7
0.9524
More...