DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LNIFPE
Uniprot ID:
O94854
Source protein:
Microtubule-actin cross-linking factor 1, isoforms 6/7
Source gene:
MACF1
Class:
LIG_APCC_ABBA_1
Location:
670:675
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9956
ASA_SCORE:
85.4167
COIL:
0.7398
CONS_SCORE:
0.6691
DSS_SCORE:
0.5046
HELIX:
0.1503
FCONS_SCORE:
1.1544
RIG_SCORE:
0.7806
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L670V
TCGA-05-4420
LUAD
TCGA
LNIFPE
LIG_APCC_ABBA_1
0.5654
p.L670V
DO24675
LUAD
ICGC
LNIFPE
LIG_APCC_ABBA_1
0.5654
p.L670I
TCGA-AP-A0LM
UCEC
TCGA
LNIFPE
LIG_APCC_ABBA_1
0.6063
p.L670I
TCGA-AP-A1DV
UCEC
TCGA
LNIFPE
LIG_APCC_ABBA_1
0.6063
p.L670I
DO43306
UCEC
ICGC
LNIFPE
LIG_APCC_ABBA_1
0.6063
p.L670I
DO43186
UCEC
ICGC
LNIFPE
LIG_APCC_ABBA_1
0.6063
p.A681T
TCGA-B5-A3FC
UCEC
TCGA
LNIFPE
LIG_APCC_ABBA_1
0.1667
p.A681T
DO41871
UCEC
ICGC
LNIFPE
LIG_APCC_ABBA_1
0.1667
p.E675D
TCGA-ND-A4WC
UCS
TCGA
LNIFPE
LIG_APCC_ABBA_1
0.5647
p.P674S
TCGA-WE-A8K4
SKCM
TCGA
LNIFPE
LIG_APCC_ABBA_1
0.5641
p.P674S
DO224815
BRCA
ICGC
LNIFPE
LIG_APCC_ABBA_1
0.5641
p.P674S
DO51281
SKCM
ICGC
LNIFPE
LIG_APCC_ABBA_1
0.5641
Drug responses associated with MACF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNIFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94854
Microtubule-actin cross-linking factor 1, isoforms 6/7
LIG_APCC_ABBA_1
670:675
LNIFPE
APC,CDC20,FZR1
0.9956
More...