DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LNKTPSSS
Uniprot ID:
Q14684
Source protein:
Ribosomal RNA processing protein 1 homolog B
Source gene:
RRP1B
Class:
DEG_SCF_FBW7_1
Location:
674:681
E3 ligase:
FBXW7
DEGRON score:
0.9609
ASA_SCORE:
93.975
COIL:
0.8905
CONS_SCORE:
0.4699
DSS_SCORE:
0.5817
HELIX:
0.0419
FCONS_SCORE:
1.5736
RIG_SCORE:
0.6546
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G687W
TCGA-BF-A1PZ
SKCM
TCGA
LNKTPSSS
DEG_SCF_FBW7_1
0.1667
p.G687W
DO229008
LICA
ICGC
LNKTPSSS
DEG_SCF_FBW7_1
0.1667
p.G687W
DO50279
SKCM
ICGC
LNKTPSSS
DEG_SCF_FBW7_1
0.1667
p.P667H
TCGA-DF-A2KU
UCEC
TCGA
LNKTPSSS
DEG_SCF_FBW7_1
0.1389
p.P667H
DO223286
UCEC
ICGC
LNKTPSSS
DEG_SCF_FBW7_1
0.1389
p.V672I
TCGA-EA-A3HU
CESC
TCGA
LNKTPSSS
DEG_SCF_FBW7_1
0.2778
p.V672I
DO6320
CESC
ICGC
LNKTPSSS
DEG_SCF_FBW7_1
0.2778
p.G669V
DO229036
LICA
ICGC
LNKTPSSS
DEG_SCF_FBW7_1
0.1944
p.S680I
DO229008
LICA
ICGC
LNKTPSSS
DEG_SCF_FBW7_1
0.7341
p.T665N
DO229264
THCA
ICGC
LNKTPSSS
DEG_SCF_FBW7_1
0.5278
Drug responses associated with RRP1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNKTPSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14684
Ribosomal RNA processing protein 1 homolog B
DEG_SCF_FBW7_1
674:681
LNKTPSSS
FBXW7
0.9609
More...